DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and tup12

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_592910.2 Gene:tup12 / 2543402 PomBaseID:SPAC630.14c Length:598 Species:Schizosaccharomyces pombe


Alignment Length:359 Identity:98/359 - (27%)
Similarity:171/359 - (47%) Gaps:45/359 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ELIETASTPGDSETEIAIPEAAFDSFKMPMLPSQFHLENSMSP-GYAIKHSLLGHSGCVTGLKFS 65
            |:|.|::.|...|.:..:..               ::.|...| ...:.|: |.|:..:..::||
pombe   260 EIIPTSNVPNREEKDWTVTS---------------NVPNKEPPISVQLLHT-LEHTSVICYVRFS 308

  Fly    66 SNGENLVSSSGDRLLKLWDLSATRCI-----QSLAGHGD-GVNDVAWSAAG-LIASCSDDMTVRL 123
            ::|:.|.:.. :|...::::...:.|     :|....|| .|..||:|..| .:|:..:|..:|:
pombe   309 ADGKFLATGC-NRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRI 372

  Fly   124 WDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVD 188
            ||...|...::|.||.:..:|..|:.....|.|.|.|.||.||||..|:...|:|. .|.:|:|.
pombe   373 WDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHT-DDGVTTVM 436

  Fly   189 FHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRYILSSTLNNTLRLWN- 252
            |..||......|.|.::|:|.|| |.:::.|...:. .|..|.|||:|:|::|.:|:||::||. 
pombe   437 FSPDGQFIAAGSLDKVIRIWTSS-GTLVEQLHGHEE-SVYSVAFSPDGKYLVSGSLDNTIKLWEL 499

  Fly   253 ----------YKKPK-CMRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQTRELVQK 306
                      ||:.. |.:|:.|| .:|..|.:  .:..|.||:|||:|.|:..|:..:......
pombe   500 QCVSNVAPSMYKEGGICKQTFTGH-KDFILSVT--VSPDGKWIISGSKDRTIQFWSPDSPHSQLT 561

  Fly   307 ISTEGDQILSTHCHPTANVIASGALQNSYAIKIW 340
            :....:.::|....|..:..|:|:  .....:||
pombe   562 LQGHNNSVISVAVSPNGHCFATGS--GDLRARIW 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 91/312 (29%)
WD40 49..341 CDD:238121 91/311 (29%)
WD40 repeat 59..96 CDD:293791 7/41 (17%)
WD40 repeat 102..137 CDD:293791 11/35 (31%)
WD40 repeat 142..178 CDD:293791 14/35 (40%)
WD40 repeat 185..220 CDD:293791 12/34 (35%)
WD40 repeat 227..263 CDD:293791 17/47 (36%)
WD40 repeat 271..309 CDD:293791 10/37 (27%)
WD40 repeat 314..340 CDD:293791 4/25 (16%)
tup12NP_592910.2 Tup_N 37..115 CDD:285748
WD40 <284..598 CDD:225201 92/320 (29%)
WD40 292..594 CDD:238121 91/312 (29%)
WD40 repeat 302..338 CDD:293791 6/36 (17%)
WD40 repeat 350..386 CDD:293791 11/35 (31%)
WD40 repeat 391..426 CDD:293791 13/34 (38%)
WD40 repeat 433..467 CDD:293791 12/34 (35%)
WD40 repeat 473..521 CDD:293791 17/47 (36%)
WD40 repeat 527..563 CDD:293791 10/37 (27%)
WD40 repeat 569..593 CDD:293791 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.860

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