DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and tup11

DIOPT Version :10

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_592873.1 Gene:tup11 / 2542299 PomBaseID:SPAC18B11.10 Length:614 Species:Schizosaccharomyces pombe


Alignment Length:309 Identity:78/309 - (25%)
Similarity:146/309 - (47%) Gaps:32/309 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDG--------VNDVAWSAA 109
            |.|...|..:|||:||:.|.:.. ::...::|:...:.:.:|  |.:.        |..:|:|..
pombe   310 LEHPSVVCCVKFSNNGKYLATGC-NQAANVFDVQTGKKLFTL--HEESPDPSRDLYVRTIAFSPD 371

  Fly   110 G-LIASCSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKT 173
            | .:.:.::|..::|||..::....|..||.:..:|..|:.....:.|.|.|.|.|||||.||:.
pombe   372 GKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQC 436

  Fly   174 LKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGYVKFSPNGRY 238
            :..:.. ::.:|::....:.......|.|.::|:| |.:|.:::.| :.....|..:.|||:...
pombe   437 ILKLEI-ENGVTAIAISPNDQFIAVGSLDQIIRVW-SVSGTLVERL-EGHKESVYSIAFSPDSSI 498

  Fly   239 ILSSTLNNTLRLWNYK----------KPK--CMRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDN 291
            :||.:|:.|:::|..:          ||:  |..||.|| .:|..|.:  .:....|.:|||:|.
pombe   499 LLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGH-TDFVLSVA--VSPDSRWGLSGSKDR 560

  Fly   292 TLCIWNLQTRELVQKISTEGDQILSTHCHPTANVIASGALQNSYAIKIW 340
            ::..|:|||.:.........:.::|....|.....|||:  .....:||
pombe   561 SMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGS--GDLRARIW 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <47..340 CDD:441893 76/307 (25%)
WD40 repeat 59..96 CDD:293791 9/36 (25%)
WD40 repeat 102..137 CDD:293791 8/35 (23%)
WD40 repeat 142..178 CDD:293791 13/35 (37%)
WD40 repeat 185..220 CDD:293791 7/34 (21%)
WD40 repeat 227..263 CDD:293791 13/47 (28%)
WD40 repeat 271..309 CDD:293791 10/37 (27%)
WD40 repeat 314..340 CDD:293791 5/25 (20%)
tup11NP_592873.1 Tup_N 9..86 CDD:400755
Atrophin-1 <119..>259 CDD:460830
WD40 306..608 CDD:238121 78/309 (25%)
WD40 repeat 316..358 CDD:293791 10/44 (23%)
WD40 repeat 364..400 CDD:293791 8/35 (23%)
WD40 repeat 405..441 CDD:293791 13/35 (37%)
WD40 repeat 447..481 CDD:293791 8/35 (23%)
WD40 repeat 487..535 CDD:293791 13/47 (28%)
WD40 repeat 541..577 CDD:293791 10/37 (27%)
WD40 repeat 583..607 CDD:293791 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.

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