DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and gldi-1

DIOPT Version :10

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_493745.1 Gene:gldi-1 / 173439 WormBaseID:WBGene00021074 Length:473 Species:Caenorhabditis elegans


Alignment Length:425 Identity:92/425 - (21%)
Similarity:163/425 - (38%) Gaps:121/425 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DSETEIAI---PEAAFDSFKMPMLPSQFHLENSMSPGYAIKHSLLGHSGCVTGLKFSSNGENLVS 73
            |.||.:.:   |:|.|                .:.|......|:.||...|...:||.:|..|.|
 Worm    74 DFETTLKLVYQPQAVF----------------RVRPVTRCSASIPGHGEPVISAQFSPDGRGLAS 122

  Fly    74 SSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSA-AGLIASCSDDMTVRLWDARS-KLCVKVLE 136
            .|||:.:::||:.....:.:...|...|..:|||. |..|||...:..:.:|:|:: :...|.|:
 Worm   123 GSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLK 187

  Fly   137 GHSRYSFSCCF-----NPQANLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIF 196
            .|.::..|..:     :|...||||...|..:.:||...|..::.:..|...:|.:.:..:|.|:
 Worm   188 RHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGLIY 252

  Fly   197 VTSSYDGLVRLWDSSTG----------HVLKTL-------------------VDVDNIP------ 226
             :.|.|..|::|.:..|          |.:.||                   :..|.:.      
 Worm   253 -SGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQKVA 316

  Fly   227 ----------------------------------------------VGYVKFSPNGRYILSSTLN 245
                                                          |..|.|||:.|||.|::.:
 Worm   317 QTRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFD 381

  Fly   246 NTLRLWNYKKPKCMRTYRGHLNEFY----CSNSNFSTTGGIWIVSGSEDNTLCIWNLQTRELVQK 306
            .:::||..:..|.:.:.|||:...|    .::|..       :||||.|:||.::.|:|:.|...
 Worm   382 KSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRL-------LVSGSADSTLKVFELKTKSLYYD 439

  Fly   307 ISTEGDQILSTHCHPTANVIASGALQNSYAIKIWK 341
            :...||::.:....|....:.||.  ....:|:|:
 Worm   440 LPGHGDEVFTVDWSPEGTKVVSGG--KDKVLKLWR 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <47..340 CDD:441893 84/384 (22%)
WD40 repeat 59..96 CDD:293791 11/36 (31%)
WD40 repeat 102..137 CDD:293791 11/36 (31%)
WD40 repeat 142..178 CDD:293791 10/40 (25%)
WD40 repeat 185..220 CDD:293791 11/63 (17%)
WD40 repeat 227..263 CDD:293791 12/35 (34%)
WD40 repeat 271..309 CDD:293791 11/37 (30%)
WD40 repeat 314..340 CDD:293791 4/25 (16%)
gldi-1NP_493745.1 NLE 7..70 CDD:462380
WD40 95..472 CDD:441893 84/386 (22%)
WD40 repeat 110..145 CDD:293791 10/34 (29%)
WD40 repeat 150..188 CDD:293791 12/37 (32%)
WD40 repeat 194..235 CDD:293791 10/40 (25%)
WD40 repeat 240..275 CDD:293791 8/35 (23%)
WD40 repeat 282..356 CDD:293791 3/73 (4%)
WD40 repeat 363..399 CDD:293791 12/35 (34%)
WD40 repeat 405..441 CDD:293791 12/42 (29%)
WD40 repeat 447..471 CDD:293791 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

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