DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and CFAP52

DIOPT Version :9

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_659491.4 Gene:CFAP52 / 146845 HGNCID:16053 Length:620 Species:Homo sapiens


Alignment Length:235 Identity:49/235 - (20%)
Similarity:101/235 - (42%) Gaps:55/235 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDRLLKLWDL---------------SATRCIQSLA 95
            |.|.::   |...||.:..:|:.:.::|..|:..:::|.:               |:..||:...
Human   410 YVINNA---HRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKR 471

  Fly    96 GHGDGVNDVAWSAAGLIASCSDDMTVRLWD----ARSKLCVKVLEGHSRYSFSC-CFNPQANLLA 155
            .:.:.|            :.|.|.|..:||    .|:::.:      :...|.| |::|:...:.
Human   472 NNEECV------------TASTDGTCIIWDLVRLRRNQMIL------ANTLFQCVCYHPEEFQII 518

  Fly   156 STSFDETVRLWDVRTGKTLKIVHAH-QDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTL 219
            ::..|..:..|:|..|..::.:... ...|..:|..::|..|||...|.||::||.:.|      
Human   519 TSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEG------ 577

  Fly   220 VDVDNIPVGY------VKFSPNGRYILSSTLNNTLRLWNY 253
             :|.::.||:      ::.||..:||:|.:.:..:..|.|
Human   578 -EVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKY 616

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <48..341 CDD:225201 48/233 (21%)
WD40 49..341 CDD:238121 47/232 (20%)
WD40 repeat 59..96 CDD:293791 9/51 (18%)
WD40 repeat 102..137 CDD:293791 6/38 (16%)
WD40 repeat 142..178 CDD:293791 8/36 (22%)
WD40 repeat 185..220 CDD:293791 11/34 (32%)
WD40 repeat 227..263 CDD:293791 9/33 (27%)
WD40 repeat 271..309 CDD:293791
WD40 repeat 314..340 CDD:293791
CFAP52NP_659491.4 WD40 1..405 CDD:225201
WD 1. /evidence=ECO:0000255 62..106
WD40 repeat 68..109 CDD:293791
WD40 100..141 CDD:197651
WD 2. /evidence=ECO:0000255 109..150
WD40 repeat 114..159 CDD:293791
WD 3. /evidence=ECO:0000255 156..195
WD40 repeat 166..201 CDD:293791
WD40 repeat 208..245 CDD:293791
WD40 repeat 253..307 CDD:293791
WD40 277..617 CDD:225201 49/235 (21%)
WD 4. /evidence=ECO:0000255 288..327
WD 5. /evidence=ECO:0000255 330..369
WD40 346..615 CDD:295369 47/232 (20%)