DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10931 and LOC101734139

DIOPT Version :10

Sequence 1:NP_611261.1 Gene:CG10931 / 37024 FlyBaseID:FBgn0034274 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_012817528.2 Gene:LOC101734139 / 101734139 XenbaseID:XB-GENE-29087571 Length:452 Species:Xenopus tropicalis


Alignment Length:237 Identity:58/237 - (24%)
Similarity:113/237 - (47%) Gaps:19/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSAAGLIASCSDDMTVRLWDARSKLC 131
            ||:.||.::...::|:|......|.::|.||...|..|......::....|. |:.:|:|.|..|
 Frog   123 NGKELVCTTHKEIIKVWSAVTGECPRTLVGHRASVTAVQMRDHMIVTGYLDG-TINVWNAESGAC 186

  Fly   132 VKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIF 196
            :..|.||:.:..:...:.|.  .||.|.|.|:|:||:..|:.|..:..|:..:|.|.:  :|...
 Frog   187 IHTLGGHTSHIHNVHLHEQR--AASCSSDRTIRVWDIEAGQCLHTLLGHKLAVTWVWY--NGRRL 247

  Fly   197 VTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVG-YVKFSP-NGRYILSSTL-NNTLRLWNYKKPKC 258
            ::.....:||.||..|...|:::    ::..| |::|:. :|::|:|... ..|:.:|:.:..:.
 Frog   248 LSEDLSHIVRTWDPETETCLRSV----SLRCGTYLRFAHFDGKHIVSLLCPEETIAVWDGETLEH 308

  Fly   259 MRTYRGHLNEFYCSNSNFSTTGGIWIVSGSEDNTLCIWNLQT 300
            .||..|.........::.     :.:|:..  :...|||::|
 Frog   309 TRTIPGTYTAVMTLKNSI-----LGVVNSG--HAAEIWNVET 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10931NP_611261.1 WD40 <47..340 CDD:441893 58/237 (24%)
WD40 repeat 59..96 CDD:293791 8/28 (29%)
WD40 repeat 102..137 CDD:293791 8/34 (24%)
WD40 repeat 142..178 CDD:293791 11/35 (31%)
WD40 repeat 185..220 CDD:293791 9/34 (26%)
WD40 repeat 227..263 CDD:293791 10/38 (26%)
WD40 repeat 271..309 CDD:293791 5/30 (17%)
WD40 repeat 314..340 CDD:293791
LOC101734139XP_012817528.2 F-box_SF 9..59 CDD:459239
WD40 47..393 CDD:441893 58/237 (24%)
WD40 repeat 158..191 CDD:293791 7/33 (21%)
WD40 repeat 197..231 CDD:293791 11/35 (31%)
WD40 repeat 276..313 CDD:293791 9/36 (25%)
WD40 repeat 338..394 CDD:293791 4/6 (67%)
WD40 repeat 402..428 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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