DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir54a and Ir100a

DIOPT Version :9

Sequence 1:NP_611259.2 Gene:Ir54a / 37022 FlyBaseID:FBgn0034272 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:629 Identity:121/629 - (19%)
Similarity:209/629 - (33%) Gaps:225/629 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LQKDLALLENFTSSLMDFPSQKK--IVYISNNFSDPTRMD------YIFETCYHRR-----IWNI 139
            |:..|...|:..:.|:.|..|:|  |:..:.....|:|..      :||:..:..:     ::|.
  Fly    40 LELHLRTSEDGGNDLVQFLMQEKSSIIISAKQEEVPSRAKIMRHHFFIFDGVHQMQEIRTSLFNT 104

  Fly   140 VGLLASDEHRYFYRYHLYPSFRTEYRSLESSTI--------FDKDFPNMHGH----------PLT 186
            .|         ||           ..:||::||        |..|....|||          ...
  Fly   105 DG---------FY-----------ILALENNTIEDDVLLMEFAADVWLQHGHSRIYYVQLSKKSV 149

  Fly   187 VMPDQWLPRSVLYVDRRTGKQILAGSVGRFFH--------------------VLSWKLNATLQLS 231
            ::.:.:|.|.|:..|.:|..:|.....|  :|                    ||| ...|..:|:
  Fly   150 LLFNPFLQRLVVVQDSKTYSRIYKDLEG--YHLRIYIFDSVYSSVIGDGENKVLS-VTGADAKLA 211

  Fly   232 KKVTTGRFLNATA--LKELSESF-------------------SVDVP-ASLTIMERVEQLASTSY 274
            |  |..|.||.||  :....|.|                   .||:. |...|.:.:......|.
  Fly   212 K--TVARQLNFTADFVWPDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSA 274

  Fly   275 PMEVTHVCLMVPVARRIPIKDIYFILSSASNMFLAIVIVSSYGLALNLLRNMTHRDVRLVDFVLN 339
            .:.:..:||.|..|:||| :.|..:.:...:::|..::|...|..:.|:       :|.|:.:| 
  Fly   275 AVYMDELCLYVKKAQRIP-QSILPLFAVHMDVWLCFLLVGLLGALVWLI-------LRAVNLIL- 330

  Fly   340 DKALRGILGQSFNLPLSRSFSTRLIFLMLGIVGLN---------------------VSSIFGAGL 383
              .:.|:...|....:|...:.|.||:...::.:.                     ||.||||.|
  Fly   331 --GIEGVPDGSRATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALL 393

  Fly   384 DTLMA----------------------------HPPRQFQARSFAG-----LRR--TKIPLVTTE 413
            ::.:|                            ||  .|:...|.|     .||  .|:.||...
  Fly   394 ESSLATVYIRPLYYRDVNTLRELDESGQPIYIKHP--AFKDDLFYGHNSEVYRRLDAKMMLVAEG 456

  Fly   414 EDFPTWMKLRVPMLVVNVSEYNHLRNGRNTSNAYFASRLYWNLFSEQQKRFTRELFIYSTDDCLW 478
            |:          .|:..||:    |.|       ||.............|:.....::...:|..
  Fly   457 EE----------RLIEMVSK----RGG-------FAGVTRSASLQLSDIRYVMTKKVHKIPECPK 500

  Fly   479 SLALLSFQWPQNSLFTEPVSQLILEVNANGLYDFWVGMHYYDMTAAGLSGLEDPSLQLKEREHPT 543
            :.. :::..|:.|.:.|.|::::|.:.|.|:...|.|                   :.|||.   
  Fly   501 NYH-IAYVLPRPSPYLEEVNRIVLRLVAGGIVGLWTG-------------------EAKERA--- 542

  Fly   544 SLRIVDFQWMWQAYGTFMVIAILVFLLEVS-WHRITSLFVSLVY 586
                   :|..|.:..::.      .|:|. |..:|...|.|.:
  Fly   543 -------KWSIQRFPEYLA------ELDVGRWKVLTLSDVQLAF 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir54aNP_611259.2 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 11/46 (24%)
Lig_chan <439..580 CDD:278489 35/192 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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