DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir54a and Ir40a

DIOPT Version :9

Sequence 1:NP_611259.2 Gene:Ir54a / 37022 FlyBaseID:FBgn0034272 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:631 Identity:119/631 - (18%)
Similarity:209/631 - (33%) Gaps:159/631 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VIMIRIDYCPYNWAKDIFENQTIPVVVLSDSETFI-------NIRMFSRPLHVACLPGHELQKDL 92
            |::.|    |...|..|:.||..|   .|||:..:       |:.:...||         |...|
  Fly   159 VVVTR----PRKKAFRIYYNQARP---CSDSQLQLVNWYDGDNLGLQRIPL---------LPTAL 207

  Fly    93 ALLENFTSSLMDFPSQKK-----IVYISNNFSDPTRMDYIFETCYHRRIWNIVGLLASDEHRYFY 152
            ::..||.......|....     :.|.:|:|.:....:.: ::...|:: .:.|   ..:||...
  Fly   208 SVYANFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSL-DSIEKRKV-RVTG---GRDHRLLM 267

  Fly   153 RYHLYPSFRTEYRSLESSTIFDKDFPNMHGHPLTVMPDQWLPRSVLYVDRRTGKQILAGSVG--- 214
            ....:.:||.:|......|                   |...||   .|.:.......|.:|   
  Fly   268 LLSKHMNFRFKYIEAPGRT-------------------QGSMRS---EDGKDSNDSFTGGIGLLQ 310

  Fly   215 ----RFF---HVLSWKLNATLQLS--KKVTTGRFLNAT-ALKELSESFSVDVPASLTIMERVEQL 269
                .||   ..|||:....::.|  ....:|.|  || |.:.|:|:.::..|....|...:...
  Fly   311 SGQADFFLGDVGLSWERRKAIEFSFFTLADSGAF--ATHAPRRLNEALAIMRPFKQDIWPHLILT 373

  Fly   270 ASTSYPMEVTHVCLMVPVARRIPIKDIYFILSSASNMFLAIVIVSSYGLALNLLRNMTHRDVRLV 334
            ...|.|:....:.|.....||....|:..:    ..:::.:..:......|..|:..|......:
  Fly   374 IIFSGPIFYGIIALPYIWRRRWANSDVEHL----GELYIHMTYLKEITPRLLKLKPRTVLSAHQM 434

  Fly   335 DFVLNDK----ALRGILGQSFNLPLSRSFSTRLIFLMLGIVGLNV-SSIFGAGLDTLMAHPPRQF 394
            ...|..|    .||..|.||.| .|...:..:.:.::..|....| :.::.|.|.:..|.|.|:.
  Fly   435 PHQLFQKCIWFTLRLFLKQSCN-ELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREP 498

  Fly   395 QARSFAGLRRTKI-------------PLVTTEEDFPTWMKLRVPM-------------------- 426
            ...:...|:...|             .|...|.....:.:|...|                    
  Fly   499 PINTLQRLQAAMIHDGYRLYVEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGI 563

  Fly   427 -LVVNVSEYNHLRNGRNTSNAYFASRLYW-NLFSEQQKRFTRELFIYSTDDCLWSLALLSFQWPQ 489
             |:....|...:..||.|  .:|..:.|. |.|...||.:||           :|...:....| 
  Fly   564 KLIAEGGEDKAVLGGRET--LFFNVQQYGSNNFQLSQKLYTR-----------YSAVAVQIGCP- 614

  Fly   490 NSLFTEPVSQLILEVNANGLYDFWVGMHY---YDMTAAGLSGLEDPSLQLKERE----------- 540
               |...::.:::::..:|:.|......|   |....|  :.:...|:|.|..|           
  Fly   615 ---FLGSLNNVLMQLFESGILDKMTAAEYAKQYQEVEA--TRIYKGSVQAKNSEAYSRTESYDST 674

  Fly   541 --HPTSLRIVDFQWMWQAYGTFMVIAILVFLLEVSWHRITSLFVSL 584
              .|.:||::  |..:.|.|...:.|.::.|||:       :|:.|
  Fly   675 VISPLNLRML--QGAFIALGVGSLAAGVILLLEI-------VFIKL 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir54aNP_611259.2 None
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 24/148 (16%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 20/95 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 25/157 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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