DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-A and SPT14

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_015150.2 Gene:SPT14 / 855928 SGDID:S000006096 Length:452 Species:Saccharomyces cerevisiae


Alignment Length:487 Identity:183/487 - (37%)
Similarity:274/487 - (56%) Gaps:75/487 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRYVTGYLKVYYLPIKVCYN 67
            |.|:.|||||.:||||.|:|:|||.|:.|||.:|::||||.|..|:|::|..||||::|..|.:.
Yeast     5 IAMLCDFFYPQLGGVEFHIYHLSQKLIDLGHSVVIITHAYKDRVGVRHLTNGLKVYHVPFFVIFR 69

  Fly    68 QCILPTAVCNVPMLRAVLLRERVEVVHGHSAFSALAHEALMVGSLLGLKTVFTDHSLFGFADLSA 132
            :...||.....|::|.:||||::::||.|.:.|..|||.::..:.:||:||||||||:||.:|::
Yeast    70 ETTFPTVFSTFPIIRNILLREQIQIVHSHGSASTFAHEGILHANTMGLRTVFTDHSLYGFNNLTS 134

  Fly   133 ALTNNLLEVNLGMVNHAICVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTP-DP----QQRPS 192
            ...|.||...|..::..||||:..|||.::|..::...:|||||||.:..|.| ||    :::.|
Yeast   135 IWVNKLLTFTLTNIDRVICVSNTCKENMIVRTELSPDIISVIPNAVVSEDFKPRDPTGGTKRKQS 199

  Fly   193 NDIINIVVASRLVYRKGIDLLAGIIPRF-KNTPNINFIIVGDGPKRDLLEEIREKTNMQERVQMV 256
            .|.|.|||..||...||.|||..|||:. .:..::.||:.|||||....:::.|...:|:|||::
Yeast   200 RDKIVIVVIGRLFPNKGSDLLTRIIPKVCSSHEDVEFIVAGDGPKFIDFQQMIESHRLQKRVQLL 264

  Fly   257 GAVEHNRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLPKSLILLAEPEI 321
            |:|.|.:|||.|.:|.|:|:.|||||:...:||||||.|.:|:|.|||||||||..:.:.||   
Yeast   265 GSVPHEKVRDVLCQGDIYLHASLTEAFGTILVEAASCNLLIVTTQVGGIPEVLPNEMTVYAE--- 326

  Fly   322 DAIYAAILIAIDRHRKSSFKVSPSVGNGHLASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQ 386
                                 ..||.:  |....|..:...|.:.:||                 
Yeast   327 ---------------------QTSVSD--LVQATNKAINIIRSKALDT----------------- 351

  Fly   387 NSSTEPVMCPYRCNELVETLYNWEDVALRTVKVYDRVLNERSFTTS-------ELVFAVWQH-GS 443
             ||         .::.|..:|:|.|||.|||::|..:    |.|:|       ::|..:::. |.
Yeast   352 -SS---------FHDSVSKMYDWMDVAKRTVEIYTNI----SSTSSADDKDWMKMVANLYKRDGI 402

  Fly   444 W----FLVFFVVAHFLMRLLELWRPRKHVEIA 471
            |    :|:..:|.:.|..|||...||..:::|
Yeast   403 WAKHLYLLCGIVEYMLFFLLEWLYPRDEIDLA 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 144/311 (46%)
GT1_PIG-A_like 2..451 CDD:99970 175/465 (38%)
SPT14NP_015150.2 GT4_PIG-A-like 4..408 CDD:340827 174/459 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346351
Domainoid 1 1.000 114 1.000 Domainoid score I1332
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1982
Inparanoid 1 1.050 299 1.000 Inparanoid score I505
Isobase 1 0.950 - 0 Normalized mean entropy S691
OMA 1 1.010 - - QHG53778
OrthoFinder 1 1.000 - - FOG0002788
OrthoInspector 1 1.000 - - oto99079
orthoMCL 1 0.900 - - OOG6_100580
Panther 1 1.100 - - LDO PTHR45871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R517
SonicParanoid 1 1.000 - - X3161
TreeFam 1 0.960 - -
1615.740

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