DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-A and alg2

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001025660.1 Gene:alg2 / 595052 XenbaseID:XB-GENE-494529 Length:404 Species:Xenopus tropicalis


Alignment Length:413 Identity:78/413 - (18%)
Similarity:143/413 - (34%) Gaps:109/413 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FFYP--SIGGVEEHVYNLSQMLLSLGHKIVVLT------HAYGDC--SGI----------RYVTG 53
            |.:|  .|||.|..|.:.:..|.|.|..:.|.|      |.:.:.  |||          |.:.|
 Frog     7 FVHPDLGIGGAERLVVDAALALKSRGCHVQVWTSHYDPDHCFSETRDSGIPIRCCGDWLPRSLLG 71

  Fly    54 -------YLKVYYLPIKVCY--------------NQCILPTAVCNVPMLRAVLLRERVEVV-HGH 96
                   |:::.:|.:.:.:              :.||        |..:  |.|:..:|: :.|
 Frog    72 RCHALCAYIRMIFLTLYIVFLSGEEFDVVFCDQVSACI--------PFFK--LARDSKKVLFYCH 126

  Fly    97 SAFSALAHEALMVGSLLGLKTVFTDHSLFGFAD---LSAALTNNLLEVNLGMVNHAICVSHIGKE 158
            .....|.....:|..:......:.:....|.||   :::..|:.:.:.....:.|.        |
 Frog   127 FPDQLLTQRLSLVKRMYRAPIDWLEEKTTGMADCILVNSYFTSAIFKETFASLAHI--------E 183

  Fly   159 NTVL--RARVAKHRVSVIPNAVDTALFTPDPQ---------QRPSNDIINIVVASRLVYRKGIDL 212
            .|||  ...|:....:|..:..|  ||....|         :|..|  :::.:.|....||.:.|
 Frog   184 PTVLYPSLNVSNFESTVFEDVSD--LFPAKRQNIFLSINRFERKKN--LHLALESMCKLRKRLSL 244

  Fly   213 LAGIIPRFKNTPNINFIIVGDGPKRDL--------LEEIREKTNMQERVQMVGAVEHNRVRDFLV 269
            |        ....::.|:.|...:|.|        |:|...|.::...|..:.:....:.|:.|.
 Frog   245 L--------EWERVHLILAGGYDERVLENVEHYVELKESAVKYDISNHVTFLRSFSDEQKRNLLH 301

  Fly   270 RGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLPKSLI-LLAEPEIDAIYAAILIAID 333
            .....|.|...|.:.:..:||......|::.:.||..|.:..::. .|..|..:....|:     
 Frog   302 NAICVLYTPSNEHFGIVPIEAMYMRCPVIAVNSGGPLESVENNVTGFLCSPNPEQFADAM----- 361

  Fly   334 RHRKSSFKVSPSVGN-----GHL 351
                ..|..:|.:.|     ||:
 Frog   362 ----EKFVKNPDLKNRMGESGHI 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 70/363 (19%)
GT1_PIG-A_like 2..451 CDD:99970 78/413 (19%)
alg2NP_001025660.1 GT1_ALG2_like 4..395 CDD:99977 78/413 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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