DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-A and gpi3

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_595519.1 Gene:gpi3 / 2540986 PomBaseID:SPBC3D6.07 Length:456 Species:Schizosaccharomyces pombe


Alignment Length:475 Identity:202/475 - (42%)
Similarity:275/475 - (57%) Gaps:62/475 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRYVTGYLKVYYLPIKVCYNQC 69
            ||||||:|..||:|.|::.|||.|:.||||::|:||||.|..|:||:|..|.|||:|:...|.:.
pombe     1 MVSDFFFPQPGGIESHIFQLSQRLIDLGHKVIVITHAYKDRVGVRYLTNGLTVYYVPLHTVYRET 65

  Fly    70 ILPTAVCNVPMLRAVLLRERVEVVHGHSAFSALAHEALMVGSLLGLKTVFTDHSLFGFADLSAAL 134
            ..|:.....|:.|.:::||.:|:||||.:.|.|.|:|::....:||||.|||||||||||..:.:
pombe    66 TFPSFFSFFPIFRNIVIRENIEIVHGHGSLSFLCHDAILHARTMGLKTCFTDHSLFGFADAGSIV 130

  Fly   135 TNNLLEVNLGMVNHAICVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTPDPQQRPSNDIINIV 199
            ||.||:..:..|||.|||||..:|||||||.:...||||||||:....|.||| .:.|.|.:.||
pombe   131 TNKLLKFTMSDVNHVICVSHTCRENTVLRAVLNPKRVSVIPNALVAENFQPDP-SKASKDFLTIV 194

  Fly   200 VASRLVYRKGIDLLAGIIPRF-KNTPNINFIIVGDGPKRDLLEEIREKTNMQERVQMVGAVEHNR 263
            |.|||.|.||||||..:|||. ...|.:.|:|.|||||...||::|||..:|:||:|:|:|.|::
pombe   195 VISRLYYNKGIDLLIAVIPRICAQHPKVRFVIAGDGPKSIDLEQMREKYMLQDRVEMLGSVRHDQ 259

  Fly   264 VRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLPKSLILLAEPEIDAIYAAI 328
            |||.:|||||:|:.|||||:...:||||||||.|:||.|||:|||||..:...|.||.|.:    
pombe   260 VRDVMVRGHIYLHPSLTEAFGTVLVEAASCGLYVISTKVGGVPEVLPSHMTRFARPEEDDL---- 320

  Fly   329 LIAIDRHRKSSFKVSPSVGNGHLASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQNSSTEPV 393
                                                  .||      |.:|.....|....||..
pombe   321 --------------------------------------ADT------LSSVITDYLDHKIKTETF 341

  Fly   394 MCPYRCNELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQHGSW----FLVFFVVAHF 454
                  :|.|:.:|:|.|||.||.||||.:.:|.:....:.:...:..|.|    |.:...:.:.
pombe   342 ------HEEVKQMYSWIDVAERTEKVYDSICSENNLRLIDRLKLYYGCGQWAGKLFCLLIAIDYL 400

  Fly   455 LMRLLE-LWRPRKHVEIAQD 473
            :|.||| :| |...::.|.|
pombe   401 VMVLLEWIW-PASDIDPAVD 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 163/304 (54%)
GT1_PIG-A_like 2..451 CDD:99970 194/450 (43%)
gpi3NP_595519.1 GT1_PIG-A_like 1..395 CDD:99970 194/448 (43%)
RfaB 1..369 CDD:223515 190/422 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 146 1.000 Domainoid score I1140
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1982
Inparanoid 1 1.050 361 1.000 Inparanoid score I459
OMA 1 1.010 - - QHG53778
OrthoFinder 1 1.000 - - FOG0002788
OrthoInspector 1 1.000 - - oto100580
orthoMCL 1 0.900 - - OOG6_100580
Panther 1 1.100 - - LDO PTHR45871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R517
SonicParanoid 1 1.000 - - X3161
TreeFam 1 0.960 - -
1413.860

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