DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-A and Alg11

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001230090.1 Gene:Alg11 / 207958 MGIID:2142632 Length:492 Species:Mus musculus


Alignment Length:408 Identity:76/408 - (18%)
Similarity:138/408 - (33%) Gaps:125/408 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FFYP--SIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGD--CSGIRYVTGYLKVYYLPIKVCYNQC 69
            ||:|  :.||..|.|...:...|...:...|.....||  .||.:.:.|..:.:  .||:.:   
Mouse    67 FFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRF--NIKLAH--- 126

  Fly    70 ILPTAVCNVPMLRAVLLRERVEV---------VHGHSAFS-ALAHEALM---------------- 108
                      .::.|.||:|..|         :.|.|..| .|..||||                
Mouse   127 ----------PVQFVFLRKRYLVEDSRYPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFT 181

  Fly   109 -----------VGSLLGLKTVFTD-------------------------------HSLFGFADLS 131
                       |||.:...|:.||                               :.||.|....
Mouse   182 LPLFKYVGGCRVGSYVHYPTISTDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGL 246

  Fly   132 AALTNNLLEVNLG-MVNHAICVSHIGKENTVLR--------ARVAKHRVSVIPN--AVDTALFTP 185
            ....::::.||.. .:||.:.:..:|....::.        ..:..|...|.|.  .|....|.|
Mouse   247 VGSCSDIVMVNSSWTLNHILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFRP 311

  Fly   186 DPQQRPSNDIINIVVASRLVYRKGIDLLAGIIPRFKNTPNINFIIVGDGPKRD------LLEEIR 244
            :     .|..:.|...::|:..|..:|          ..::..:::|....:|      .|..:.
Mouse   312 E-----KNHALQIKAFAKLLNEKAAEL----------GHSLKLVLIGGCRNKDDEFRVNQLRSLS 361

  Fly   245 EKTNMQERVQMVGAVEHNRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVL 309
            |...:||.|:....:..:.::::|....|.|:|...|.:.:.:||..:.|..:::.:.||     
Mouse   362 ENLGVQENVEFKINISFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTVILAHNSGG----- 421

  Fly   310 PK-SLILLAEPEIDAIYA 326
            || .:::..|.:|....|
Mouse   422 PKLDIVIPHEGQITGFLA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 71/388 (18%)
GT1_PIG-A_like 2..451 CDD:99970 76/408 (19%)
Alg11NP_001230090.1 PLN02949 64..492 CDD:215511 76/408 (19%)
GT1_ALG11_like 64..480 CDD:99978 76/408 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.