DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-A and Piga

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_035211.2 Gene:Piga / 18700 MGIID:99461 Length:485 Species:Mus musculus


Alignment Length:484 Identity:230/484 - (47%)
Similarity:305/484 - (63%) Gaps:62/484 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRYVTGYLKVYYLPIKVCYN 67
            ||||||||||::||||.|:|.|||.|:..|||::.:|||||:..|:||:|..|||||||::|.||
Mouse    35 ICMVSDFFYPNMGGVESHIYQLSQCLIERGHKVITVTHAYGNRKGVRYLTNGLKVYYLPLRVMYN 99

  Fly    68 QCILPTAVCNVPMLRAVLLRERVEVVHGHSAFSALAHEALMVGSLLGLKTVFTDHSLFGFADLSA 132
            |....|...::|:||.:.:|||:.::|.||:|||:||:||.....:||:|||||||||||||:|:
Mouse   100 QSTATTLFHSLPLLRYIFVRERITIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFADVSS 164

  Fly   133 ALTNNLLEVNLGMVNHAICVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTPDPQQRPSNDIIN 197
            .|||.||.|:|...||.||||:..||||||||.:....|||||||||...|||||.:| .:.:|.
Mouse   165 VLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPDPFRR-HDSVIT 228

  Fly   198 IVVASRLVYRKGIDLLAGIIPRF-KNTPNINFIIVGDGPKRDLLEEIREKTNMQERVQMVGAVEH 261
            :||.||||||||.|||:||||.. :....::|:|.|:||||.:|||:||:..:.:|||::||:||
Mouse   229 VVVVSRLVYRKGTDLLSGIIPELCQKYQELHFLIGGEGPKRIILEEVRERYQLHDRVQLLGALEH 293

  Fly   262 NRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLPKSLILLAEPEIDAIYA 326
            ..||:.||:||||||||||||:|||||||||||||||||.|||||||||:|||:|.||.:.::  
Mouse   294 KDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTKVGGIPEVLPESLIILCEPSVKSL-- 356

  Fly   327 AILIAIDRHRKSSFKVSPSVGNGHLASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQNSSTE 391
                 .|...|:.|:|....                             |||             
Mouse   357 -----CDGLEKAIFQVKSGT-----------------------------LPA------------- 374

  Fly   392 PVMCPYRCNELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQH-----GSWFLVFFVV 451
                |...:.:|:|.|.|.:||.||.|||:||..|......:.:..:..|     |..|.:..|:
Mouse   375 ----PENIHNVVKTFYTWRNVAERTEKVYERVSKETVLPMHKRLDRLISHCGPVTGYMFALLAVL 435

  Fly   452 AHFLMRLLELWRPRKHVEIAQDV--QRRA 478
            ::..:..|:...|...:::|.|.  .|||
Mouse   436 SYLFLIFLQWMTPDSFIDVAIDATGPRRA 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 188/306 (61%)
GT1_PIG-A_like 2..451 CDD:99970 222/453 (49%)
PigaNP_035211.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
GT4_PIG-A-like 34..433 CDD:340827 222/451 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849716
Domainoid 1 1.000 171 1.000 Domainoid score I3747
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1982
Inparanoid 1 1.050 416 1.000 Inparanoid score I1809
Isobase 1 0.950 - 0 Normalized mean entropy S691
OMA 1 1.010 - - QHG53778
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002788
OrthoInspector 1 1.000 - - oto92198
orthoMCL 1 0.900 - - OOG6_100580
Panther 1 1.100 - - LDO PTHR45871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R517
SonicParanoid 1 1.000 - - X3161
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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