DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-A and algn-1

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_498420.2 Gene:algn-1 / 175920 WormBaseID:WBGene00020820 Length:491 Species:Caenorhabditis elegans


Alignment Length:480 Identity:91/480 - (18%)
Similarity:164/480 - (34%) Gaps:165/480 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LPIKVCYNQCIL------PTAVCNVPMLRAVLLRERVEV----------VHGHSAFSALAHEALM 108
            ||:|:.:|...|      .|:..|   ||.:|::....:          :...:.||...|..:.
 Worm    84 LPLKLFWNFITLFLALAFQTSAFN---LRIILMQNPPALPTMIVCFMFSIFKFAKFSIDWHNYMY 145

  Fly   109 VGSLLGLKTVFTDHSLF---------------GFADLSAALTNNLLEVNLGMVNHAICVSHIGKE 158
              |:|..|...||..:|               ||.:   .|...|.:.||       ||::..:.
 Worm   146 --SILQNKYQLTDDQVFGNDKKTKKAQIVRCVGFLE---GLCGKLSDYNL-------CVTNAMRR 198

  Fly   159 NTV----LRARVA-------KHRVSVIPNAVDTALFTPDPQQ--------------RPSNDIINI 198
            :.:    :||...       |.|.:.|....|..|.....::              :.||.::.:
 Worm   199 DLMDRWGIRASTFYDRPPTWKFRDTTIQEIHDLYLRLSQKERILQGKDEDSTILTHKSSNGVVQL 263

  Fly   199 VVASRLVYRKG--------IDLLAGIIPRFKNT---PNINFIIVGDGP-KRDLLEEIREKT--NM 249
            :....:|:...        .::|...:..:..|   |.:..||.|.|| |...|:||.||.  |:
 Worm   264 LTTRPIVFLSSTSWTPDERFEILLDALVAYDKTIGLPRVLMIITGKGPLKAKYLQEIHEKNLKNV 328

  Fly   250 QERVQMVGAVEHNRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLPKSLI 314
            ......:.|.::.:                       |:.:|..|:. :.||..|:.  ||..::
 Worm   329 DVLTPWLEAEDYPK-----------------------ILASADLGIS-LHTSTSGLD--LPMKVV 367

  Fly   315 LLAEPEIDAIYAAILIAIDRHRKSSFKVSPSVGNGHLASDANGKVKRRRRRKVDTPISPTQLPAV 379
            .:...::.|: |.....||       ::.....||:|..|:. ::.|             |:..:
 Worm   368 DMFGAKVPAL-ALKFKCID-------ELVEEKTNGYLFDDSE-QLSR-------------QIIEL 410

  Fly   380 SAPPADQNSSTEPVMCPYRCNELVETLYNWEDVALRTVKVYD--RVLNERSFTTSELVFAVWQHG 442
            |..            .|..||||:....|.::      :.:|  .|:.:|| .||...|.|..:|
 Worm   411 SRG------------FPNNCNELIRLKKNTQE------QKFDSWEVMWKRS-ATSGADFRVPDNG 456

  Fly   443 ----------SWFLVFFVV-AHFLM 456
                      |:|.:..:: .|..|
 Worm   457 FAKLRAIIQFSFFAILLIMPIHLFM 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 59/318 (19%)
GT1_PIG-A_like 2..451 CDD:99970 89/472 (19%)
algn-1NP_498420.2 GT1_ALG1_like 11..447 CDD:99986 83/444 (19%)
PLN02275 12..410 CDD:215155 71/388 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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