DRSC/TRiP Functional Genomics Resources

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Protein Alignment PIG-A and piga

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_002942607.3 Gene:piga / 100158632 XenbaseID:XB-GENE-996765 Length:492 Species:Xenopus tropicalis


Alignment Length:477 Identity:230/477 - (48%)
Similarity:301/477 - (63%) Gaps:62/477 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRYVTGYLKVYYLPIKVCYN 67
            ||||||||||::||||.|:|.|||.|:..|||::::||||||..||||:|..|||||||:||.||
 Frog    29 ICMVSDFFYPNVGGVESHIYQLSQCLIERGHKVIIVTHAYGDRKGIRYLTNGLKVYYLPLKVMYN 93

  Fly    68 QCILPTAVCNVPMLRAVLLRERVEVVHGHSAFSALAHEALMVGSLLGLKTVFTDHSLFGFADLSA 132
            |....|.:.::|:||.:.:||||.|:|.||:|||:||:||.....:||.|||||||||||||:|:
 Frog    94 QSTATTLLHSLPLLRFIFVRERVSVIHSHSSFSAMAHDALFHAKTMGLHTVFTDHSLFGFADVSS 158

  Fly   133 ALTNNLLEVNLGMVNHAICVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTPDPQQRPSNDIIN 197
            .|||.||.|:|...||.||||:..||||||||.:....|||||||:|...|||||:.| ....|.
 Frog   159 VLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAIDPTDFTPDPKIR-DRSRIT 222

  Fly   198 IVVASRLVYRKGIDLLAGIIPRF-KNTPNINFIIVGDGPKRDLLEEIREKTNMQERVQMVGAVEH 261
            :||.||||||||||||.||||.. :..||::|||.|:||||.:|||:||:..:.:||:::||:||
 Frog   223 VVVVSRLVYRKGIDLLGGIIPEMCQRYPNLHFIIGGEGPKRIILEEVRERYQLHDRVRLLGALEH 287

  Fly   262 NRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLPKSLILLAEPEIDAIYA 326
            .:||:.||:|.||||||||||:||||||.||||||||||.|||||||||::.|:|.:|.:.::.:
 Frog   288 QQVRNVLVQGDIFLNTSLTEAFCMAIVEGASCGLQVVSTRVGGIPEVLPENFIILCKPSVKSLCS 352

  Fly   327 AILIAIDRHRKSSFKVSPSVGNGHLASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQNSSTE 391
            .:..||:|               .||.:                                     
 Frog   353 GLEQAINR---------------LLAGE------------------------------------- 365

  Fly   392 PVMCPYRCNELVETLYNWEDVALRTVK--VYDRVLNERSFTTSELVFAVWQH-----GSWFLVFF 449
             ::.|...:..|.|.|.|.|||.||.|  ||:||..|......:.:..:.:|     |..|.:|.
 Frog   366 -LLSPETIHRTVSTFYTWRDVAERTEKVCVYNRVAQEVVLPMDQRLERLVRHCGVVTGCIFALFA 429

  Fly   450 VVAHFLMRLLELWRPRKHVEIA 471
            :|:..|:..|....|...::||
 Frog   430 IVSFLLLNFLRWMTPDSSIDIA 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 193/306 (63%)
GT1_PIG-A_like 2..451 CDD:99970 224/455 (49%)
pigaXP_002942607.3 GT4_PIG-A-like 28..429 CDD:340827 223/453 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 170 1.000 Domainoid score I3747
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1982
Inparanoid 1 1.050 415 1.000 Inparanoid score I1783
OMA 1 1.010 - - QHG53778
OrthoDB 1 1.010 - - D305260at33208
OrthoFinder 1 1.000 - - FOG0002788
OrthoInspector 1 1.000 - - oto102510
Panther 1 1.100 - - LDO PTHR45871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R517
SonicParanoid 1 1.000 - - X3161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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