DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hyccin and hycc1

DIOPT Version :10

Sequence 1:NP_611256.1 Gene:Hyccin / 37019 FlyBaseID:FBgn0034269 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_012820387.2 Gene:hycc1 / 780214 XenbaseID:XB-GENE-854836 Length:526 Species:Xenopus tropicalis


Alignment Length:542 Identity:140/542 - (25%)
Similarity:254/542 - (46%) Gaps:86/542 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LVRDWLADYQRIRGQPSEAEAFVVEHETDPEIAEAIFTIFNERQRNETLVHDICQQLLAFYRSPE 68
            :|.:||::::.:......:.|..::::.  .:..|::.:..:.|  ..|:..:|.||..||||.|
 Frog     8 VVEEWLSEFKTLPEASISSYASGLKNKI--SLVSALYEVIQKPQ--SELLEPVCHQLFEFYRSKE 68

  Fly    69 QTLHKFPLQFIPVLLYTYLHSVAGGDKKAARGVETLLICIYNGEVSTEDGGQKVVAFRMPILAQT 133
            :.|..|.|||:|.|::.||...:..:.::...:|.||:.|||.|:..|.|..|:::|.:|.|::.
 Frog    69 KCLGTFTLQFLPELIWCYLSMSSSRELQSCGCIEALLLSIYNLEIMDEQGHSKILSFTIPSLSKP 133

  Fly   134 SVYHE---VKNLPMTDLRRWEENCNREVKWGPHQRIESIHAQNRMRILTALLFCYNQQVSQTQKS 195
            |||||   :.::.:|:....:....|.|..|||.:.|.:.||||..:|:.||.|||..::.....
 Frog   134 SVYHEPSSIGSMALTEGALSQHGLTRVVYSGPHPQREMLTAQNRFEVLSFLLLCYNSVLNDMPAL 198

  Fly   196 SLLHLCRVTSQLVNQGFTTKSGHGHRMSYGSDPATGVPFPKPSSPRIPLSAAFLIELVHAIYFAM 260
            |||.||::.|:|...|:..::...::         |:      ..|||:|:.|:::|:..||::.
 Frog   199 SLLSLCQMCSRLCVCGYPRQNARKYQ---------GI------KNRIPISSEFMVQLLTGIYYSF 248

  Fly   261 FNGFGTIAIQTLDDIHNRAIYEMYSEVILVTSAVRNSLHANPSGQPNDGPMGLSVALTPSTTTVT 325
            :||....|.:.|||:..||..|:..|.:|:.:|::.||.........:|...:.|.:||:    :
 Frog   249 YNGEWDAARRALDDVLYRAQLELLPEPLLLANAIKASLPQGALKGNKEGSRCIQVEITPT----S 309

  Fly   326 TSVSKSMITNASFRTK--KLPDDIPIQVQDLTIQQAPQQLASVTEETEPGTKESPS-TKESSGTR 387
            :.:|::.:|:.|.|..  |..|.     .|||.|....:::.|:|...|....:.| |..|....
 Frog   310 SRISRNAVTSMSIRGHRWKRHDS-----ADLTGQDELAEISEVSEGFSPRAASNTSQTALSHSNS 369

  Fly   388 TSIMRPSMEGIKAQAHKALIAGFKKSKDKEKEKDKEPPKPPQRKFDKHTQRNSLLQLQAEPSSNS 452
            .|..:|.....:.::..:.|.|    |:||...|         ...:|..|.   |.|...|.|.
 Frog   370 NSFSKPPFGKPQRRSLGSRIGG----KEKESAGD---------SCREHLSRK---QNQRALSENL 418

  Fly   453 SAEQPPTGEVLPLQTLSLINENGSNSFSVDSDLNDGVLGVSANTSLPPLSSTTNSVTSSDLITKS 517
                    |::.::.|:|                      :.:.|||...|.:.:.|::.:.:||
 Frog   419 --------ELVSMKRLTL----------------------TTSQSLPKPGSHSLARTATAVFSKS 453

  Fly   518 FD-----SSIELAPIGHSSSNG 534
            |:     |:....|: |.:|.|
 Frog   454 FEQMSGASAAANNPV-HGNSTG 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HyccinNP_611256.1 Hyccin 20..346 CDD:462903 96/330 (29%)
hycc1XP_012820387.2 Hyccin 22..330 CDD:462903 96/330 (29%)

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