DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4984 and Tmem235

DIOPT Version :9

Sequence 1:NP_001163182.1 Gene:CG4984 / 37017 FlyBaseID:FBgn0034267 Length:447 Species:Drosophila melanogaster
Sequence 2:XP_038943435.1 Gene:Tmem235 / 688285 RGDID:1591141 Length:211 Species:Rattus norvegicus


Alignment Length:69 Identity:22/69 - (31%)
Similarity:35/69 - (50%) Gaps:19/69 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLLGCSLLMVVSLLIWIVAISTDHWIII-------SGGKGIFIPESRRFFMSSHSGLWRHC--RN 84
            :.|..:|..::|..:...|:::|:|.|:       |||..          :||||||||.|  :|
  Rat     7 LFLSAALGALLSFALLAAAVASDYWYILEVADAGSSGGAR----------LSSHSGLWRTCEGQN 61

  Fly    85 TIVP 88
            :.||
  Rat    62 SCVP 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4984NP_001163182.1 PMP22_Claudin 38..>93 CDD:304458 20/60 (33%)
Tmem235XP_038943435.1 Claudin_2 28..184 CDD:372799 18/48 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I5212
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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