DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4975 and Atxn10

DIOPT Version :9

Sequence 1:NP_001137693.2 Gene:CG4975 / 37016 FlyBaseID:FBgn0034266 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_579847.1 Gene:Atxn10 / 170821 RGDID:621813 Length:475 Species:Rattus norvegicus


Alignment Length:441 Identity:103/441 - (23%)
Similarity:176/441 - (39%) Gaps:86/441 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEHVKSETKELVHKLVR------LSITENEEEISAL-----LKNLRLLLTKGRENQETLAESAEF 54
            :||:.| :.:|:.:..|      :..:.|:..|..|     ..:|.||..:.|..|::|      
  Rat    71 VEHLAS-SLQLITECFRCLRNACIECSVNQNSIRNLDTIGVAVDLVLLFRELRVEQDSL------ 128

  Fly    55 SSFLNAVAFSPVMRTEHRLIHNLSLQVLANSVVNNETTQALIWSQHGLKIAEQAYASPLGSSNNV 119
                 ..||            ...||.|.|....||.:|:::|    :....:.:.|.|...:..
  Rat   129 -----LTAF------------RCGLQFLGNVASRNEDSQSIVW----VHAFPELFMSCLNHPDKK 172

  Fly   120 LL----MIMYNIYISGHGLITDLVALKTCLQLWRALN--EAQCTYNFEYLHFFL--EHFIVQNGR 176
            ::    ||::....|..     :..|:..|.:  |:|  ||...:......|.:  :||: ::..
  Rat   173 IVAYCSMILFTSLNSER-----MKDLEENLNI--AINVIEAHQKHPESEWPFLIITDHFL-KSPE 229

  Fly   177 ACVACYQKLETEDRVAFLDYVAHYL--RENSPNGDVTLFLLQH---FAKEFRMKSDCLLRETIKL 236
            ...|.|.||..::||..||.:...:  .|.....|:::| |:|   .|..|  ...|  |..:||
  Rat   230 LVEAMYGKLSNQERVTLLDIMIAKIVGDEQLTKDDISIF-LRHAELIANSF--VDQC--RNVLKL 289

  Fly   237 KHELHPREVHTLLRI------IASASGSE--KYANVYPNDQSLFINVSSLLRCIVSAGKEPDGGG 293
            ..|....:...|:.|      ....|.:|  .|..|:|   .|...|..:||.|.|.||  |...
  Rat   290 TSEPQTEDKEALVTIRLLDVLCEMTSNTELLGYLQVFP---GLMERVIDVLRVIHSVGK--DSTN 349

  Fly   294 LDKPMTKLEEVALTSDIDAGYEKKVSYELKTLLVRCSANLLYDNKANKGYCLDTQLLPTLLECTT 358
            :..|...|:.......:..|:        |:.|:|...||.|.||.|:....:...:|.:|:.:.
  Rat   350 IFSPSDSLKAEGDIEHMTEGF--------KSHLIRLIGNLCYKNKENQDKVNELDGIPLILDSSN 406

  Fly   359 MDARNPLMREWSILAIRNACINCPEAQQVIAGLTMQGSAPNDILTELNLDM 409
            :|..||.|.:|.:.|:||...:..:.|..||.:..||.|...:|.::..::
  Rat   407 IDDNNPFMMQWVVYAVRNLTEDNSQNQDFIAKMEEQGLADASLLKKMGFEV 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4975NP_001137693.2 Atx10homo_assoc 322..408 CDD:286802 26/85 (31%)
Atxn10NP_579847.1 Atx10homo_assoc 370..467 CDD:401636 26/96 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11110
eggNOG 1 0.900 - - E1_KOG2676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 68 1.000 Inparanoid score I5241
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005736
OrthoInspector 1 1.000 - - oto96875
orthoMCL 1 0.900 - - OOG6_104233
Panther 1 1.100 - - LDO PTHR13255
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.820

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