DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx16 and snx25

DIOPT Version :10

Sequence 1:NP_611252.1 Gene:Snx16 / 37015 FlyBaseID:FBgn0034265 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001156765.1 Gene:snx25 / 793657 ZFINID:ZDB-GENE-121105-11 Length:961 Species:Danio rerio


Alignment Length:147 Identity:39/147 - (26%)
Similarity:60/147 - (40%) Gaps:30/147 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 EVMEERAR-----FTAYKLRVENPETNDYWLVMRRYTDFVRLNSKLKQAFPNL-TLMLPR-KKLF 287
            |..||...     |.|..|..|:...|::|.|.|:..:|..|:.||.:.||:| .:.||. .||.
Zfish   645 EASEENGEQMACYFVAVSLSEEDDCKNNHWTVSRKLIEFQALHRKLTECFPSLKKVQLPSLSKLP 709

  Fly   288 GDNFNAVFLDNRVQGLQIFVNSVMAKEELRKCKLVREFFCLDEPPSYSESMEECRAIFEAQEETI 352
            ..:.:..|||.....|..|:..|:..|  |.|                    :..|::.....:.
Zfish   710 FKSIDQKFLDKSKNQLNAFLQKVLTDE--RMC--------------------QSEALYAFLSPSP 752

  Fly   353 EHLK-LQIRNKNDLILS 368
            |||| :.|:.|:...|:
Zfish   753 EHLKVIDIQKKSSFSLA 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx16NP_611252.1 PX_SNX16 219..329 CDD:132809 31/105 (30%)
snx25NP_001156765.1 PXA 124..280 CDD:460484
RGS 417..525 CDD:470619
PX_SNX25 630..751 CDD:132788 32/127 (25%)
Nexin_C 827..930 CDD:462541
Blue background indicates that the domain is not in the aligned region.

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