DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx16 and Kif16b

DIOPT Version :10

Sequence 1:NP_611252.1 Gene:Snx16 / 37015 FlyBaseID:FBgn0034265 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_038960967.1 Gene:Kif16b / 311478 RGDID:1310146 Length:1876 Species:Rattus norvegicus


Alignment Length:379 Identity:75/379 - (19%)
Similarity:139/379 - (36%) Gaps:109/379 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSLLKTGNSVCGLDK-----------RSQFREQKLLGRKCHSSPDLRQIGKYQNNSLLRSKSEGD 99
            |:||..||.:..||.           :::.|.|:|.....:...:.:.|.|.|..:|   :.|| 
  Rat   387 KTLLAQGNQIALLDSPTALSMEEKLHQNEARVQELTKEWTNKWNETQNILKEQTLAL---RKEG- 447

  Fly   100 VSLILASNSGAPLTVANAKSEVCLQRISSHSYEQSPRTPINKSEMLGGARSHRDLTQSSYGNQAG 164
            :.::|  :|..|..:......:....|..|..|  .:|.:.:.:    |.:.:|:..        
  Rat   448 IGVVL--DSELPHLIGIDDDLLSTGIILYHLKE--GQTYVGRED----ASTEQDIVL-------- 496

  Fly   165 GHSVDLESR-----------SRTPRRMSECSLGYSQSSSRHTGSNSMFASQMTLSSGSVVPPVDP 218
             |.:||||.           :..|...|:||:         .|...:.|:|  |:.|:|:     
  Rat   497 -HGLDLESEHCVFENAGGTVTLIPLSGSQCSV---------NGVQIVDATQ--LNQGAVI----- 544

  Fly   219 NAVLRVPIIGYEVMEERARFTAYKLRVENPETNDYWLVMRRYTDFVRLNSKLKQA-FPNLTLMLP 282
                   ::|...|          .|..:|:            :..:|..|.|.. ..:.:|.:.
  Rat   545 -------LLGRTNM----------FRFNHPK------------EAAKLREKRKSGLLSSFSLSMT 580

  Fly   283 RKKLFGDNFNAVFLDNRVQGLQIFVNSV--------MAKEELRKC----KLVREFFCLDEPPSYS 335
            ......:|.:||.|.|  .||......:        ..:|||.|.    ||:.|.  .::..|..
  Rat   581 DLSKSCENLSAVMLYN--PGLFPMKGPICLRLEFERQQREELEKLESKRKLIEEM--EEKQKSDK 641

  Fly   336 ESMEECRAIFEAQEETIEHLKLQIRNKNDLI----LSLQQKLREEMNEKEQLRE 385
            ..:|..:...|.:.:..|.::.|||.:.:.:    ..::.||::.:.|||:..|
  Rat   642 AELERMQQEVETRRKETEIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEE 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx16NP_611252.1 PX_SNX16 219..329 CDD:132809 22/122 (18%)
Kif16bXP_038960967.1 KISc_KIF1A_KIF1B 15..368 CDD:276816
Kinesin_assoc 367..479 CDD:465047 22/99 (22%)
FHA 449..565 CDD:469597 29/177 (16%)
Smc <609..>1087 CDD:440809 20/89 (22%)
Blue background indicates that the domain is not in the aligned region.

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