DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx16 and Snx15

DIOPT Version :9

Sequence 1:NP_611252.1 Gene:Snx16 / 37015 FlyBaseID:FBgn0034265 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001019923.1 Gene:Snx15 / 293691 RGDID:1305803 Length:338 Species:Rattus norvegicus


Alignment Length:168 Identity:38/168 - (22%)
Similarity:65/168 - (38%) Gaps:43/168 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 YEVMEERAR---FTAYKLRVE-----NPETNDYWLVMRRYTDFVRLNSKLKQAFPNLTLML---- 281
            |.|.:.|..   :|.||:..:     :||.....:|.:||:||.:|:..|.....||...|    
  Rat    14 YTVSDPRTHPKGYTEYKVTAQFISKKDPEDIKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFP 78

  Fly   282 --PRKKLFGDNFNAVFLDNRVQGLQIFVNSVMAKEELRKCKLVREFF------------------ 326
              ||.::|| .|.|..::.|.:|.:..:...:....|.....::|||                  
  Rat    79 AFPRAQVFG-RFEASVIEERRKGAEDLLRFTVPIPALNNSPQLKEFFRGGEVTRPSEVSRDLQIL 142

  Fly   327 ---CLDEPPSYSESMEECRAI--FEAQEETIEHLKLQI 359
               .:..|||     :|.|.:  ..|:....|.|::.:
  Rat   143 PPPLIPTPPS-----DEARLLQPLPAERRGQEELEVPV 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx16NP_611252.1 PX_SNX16 219..329 CDD:132809 30/134 (22%)
Snx15NP_001019923.1 PX_domain 10..127 CDD:295365 30/113 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..155 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..270
MIT_SNX15 268..338 CDD:239140
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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