DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Snx16 and Rps6kc1

DIOPT Version :9

Sequence 1:	NP_611252.1	Gene:	Snx16 / 37015	FlyBaseID:	FBgn0034265	Length:	407	Species:	Drosophila melanogaster
Sequence 2:	XP_006250521.1	Gene:	Rps6kc1 / 289342	RGDID:	1306578	Length:	1045	Species:	Rattus norvegicus

Alignment Length:	141	Identity:	37/141 - (26%)
Similarity:	60/141 - (42%)	Gaps:	29/141 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   229 YEVMEERAR---FTAYKL--RV---ENPETNDYWLVMRRYTDFVRLNSKL----KQAFPNLTLML 281
            |.|.|.:..   :|.||:  ||   .|||.....:|.|||:||.:|:.:|    :.||.:..|..
  Rat    15 YTVTEPQRHPRGYTIYKVTARVVSRRNPEDVQEIIVWRRYSDFKKLHRELWQIHRNAFRHSELFP 79

  Fly   282 PRKK--LFGDNFNAVFLDNRVQGLQIFVNSVMAKEELRKCKLVREFF---CLDE----------- 330
            |..|  :|| .|:...::.|.|..:..:........|...|.:::||   .:.:
  Rat    80 PFAKGTVFG-RFDKTVIEERRQCAEDLLQFSANIPALYNSKQLQDFFKGGIISDGSELIGPAEAY 143

  Fly   331 PPSYSESMEEC 341
            |.|.:.:..||
  Rat   144 PDSLANTFSEC 154

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Snx16	NP_611252.1	PX_SNX16	219..329	CDD:132809	33/116 (28%)
Rps6kc1	XP_006250521.1	PX_RPK118_like	11..128	CDD:132820	33/113 (29%)
		MIT_SNX15	237..305	CDD:239140
		PKc_like	334..>420	CDD:304357
		STKc_RPK118_like	<858..1035	CDD:270728
		S_TKc	<867..1035	CDD:214567
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2101
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900