DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx16 and Snx13

DIOPT Version :10

Sequence 1:NP_611252.1 Gene:Snx16 / 37015 FlyBaseID:FBgn0034265 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001395744.1 Gene:Snx13 / 217463 MGIID:2661416 Length:968 Species:Mus musculus


Alignment Length:381 Identity:86/381 - (22%)
Similarity:151/381 - (39%) Gaps:83/381 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SVCGLDKRSQFREQKLLGRKCHSSPDLRQIGKYQNN---SLLRSKSEGDVSLILASNSGAPLTVA 115
            :|.|....:|.:.:.|.||        ::.||.|.|   .|||:.:.|.....|:..:...:|| 
Mouse   405 TVEGYRVTAQQQLEVLSGR--------QRDGKQQTNQTKGLLRAAAVGIYEQYLSEKASPRVTV- 460

  Fly   116 NAKSEVCLQRISSHSYEQSPRTP-----INKSE---MLGGARSHRDLTQSSY------------- 159
               .:..:.:::.....:.| ||     |.:..   ||...|.:....|::.             
Mouse   461 ---DDYLVAKLADTLNHEDP-TPEIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKD 521

  Fly   160 ----GNQAGGHSVDLESRSRTPRRMSECSLGYSQSSSRHTGSNSMFASQM-TLSSGSVVPPVDPN 219
                |:..|    |.||.:.:|......||   ...|..|..:|:   |: ...|.:|....||.
Mouse   522 PSFRGSDDG----DGESFNGSPTGSINLSL---DDLSSVTSDDSV---QLHAYISDTVYADYDPY 576

  Fly   220 AVLRVPIIGYEVMEERARFTAYKLRV--ENPETNDYWLVMRRYTDFVRLNSKLKQAFPNLT--LM 280
            ||..|      ..:....:..|.:.|  .|..|.:.|...|||:||...:.::.:.|.||:  |.
Mouse   577 AVAGV------CNDHGKTYALYAITVHRRNLNTEEMWKTYRRYSDFHDFHMRITEQFENLSSILK 635

  Fly   281 LPRKKLFGDNFNAVFLDNRVQGLQIFVNSVMAKEELRK----CKLVREFFCLDEPPSYSESMEEC 341
            ||.||.| :|.:..||:.|.:.|..::..::..|.::.    ...|.:|.   |..:||:.    
Mouse   636 LPGKKTF-NNMDRDFLEKRKKDLNAYLQLLLTPEMMKASPALAHCVYDFL---ENKAYSKG---- 692

  Fly   342 RAIFEAQEET-IEHLKLQIRNKNDLILSLQQKLREEMNE--------KEQLREAMK 388
            :..|..:.:| :..|:..:||.::.:.||...|.|.:.:        .|:|.:.:|
Mouse   693 KGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGVTKMSDNVGRMSERLGQDIK 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx16NP_611252.1 PX_SNX16 219..329 CDD:132809 30/117 (26%)
Snx13NP_001395744.1 PXA 97..284 CDD:470618
RGS_SNX13 377..511 CDD:188674 25/118 (21%)
PX_SNX13 557..687 CDD:132783 37/142 (26%)
Nexin_C 803..911 CDD:462541
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.