DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlish and sh3d19

DIOPT Version :10

Sequence 1:NP_611251.2 Gene:Dlish / 37014 FlyBaseID:FBgn0034264 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_009289295.2 Gene:sh3d19 / 553811 ZFINID:ZDB-GENE-050522-481 Length:963 Species:Danio rerio


Alignment Length:275 Identity:61/275 - (22%)
Similarity:93/275 - (33%) Gaps:108/275 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GMGRITGSSSIETLVRVGIEKEHGLSPDSKMVVLHDFTPCVDDELEVKRGQLV-NILYRENDWVY 95
            |||...||..:|                    .|:||||....||.:|.|.:| |:...::||  
Zfish   720 GMGGNAGSLQVE--------------------ALYDFTPAGPGELALKAGDVVSNVEQLDDDW-- 762

  Fly    96 VIGQDSRQEGFIPFSYC---------APC-------------------------NTQLAD----- 121
            .:|......||.|.:|.         ||.                         ..:..|     
Zfish   763 YMGTCRNATGFFPINYVKVLSKPNIYAPAFRNEWKNKPSPETVRGPRCVARFDFEGEQGDELSFF 827

  Fly   122 ----LAVKKKLPR----------------------EQCPEQPIEENIPLLGTDNKLDVLCDETLN 160
                :.:|:.|..                      |..|..|::::.|     ||:.:       
Zfish   828 EDDVIQLKEYLGEEWARGEVNGHVGIFPLNFVEVIEDLPSVPVQKSAP-----NKIAL------- 880

  Fly   161 PGSANSIENTLLVEPECTPFVKEPSGR--CIVLYTFIARDENDLSVERGEFVTVLNREDPDWFWI 223
            ||.|:|...:.....|.     |.:|.  .:.||.|.|..|.||..::|:.:.|....|.:| |.
Zfish   881 PGMASSSTQSSYRASEA-----ESNGAEWAVALYDFTAETEEDLPFQQGDRILVTAHVDDEW-WS 939

  Fly   224 MRSDGQEGFVPASFI 238
            .|.:|:|||.|.:|:
Zfish   940 GRINGREGFFPKAFV 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlishNP_611251.2 SH3 61..111 CDD:212690 17/50 (34%)
SH3 184..238 CDD:214620 19/55 (35%)
SH3 293..346 CDD:212690
sh3d19XP_009289295.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.