DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlish and Ncf4

DIOPT Version :10

Sequence 1:NP_611251.2 Gene:Dlish / 37014 FlyBaseID:FBgn0034264 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_006242001.1 Gene:Ncf4 / 500904 RGDID:1593157 Length:355 Species:Rattus norvegicus


Alignment Length:204 Identity:46/204 - (22%)
Similarity:78/204 - (38%) Gaps:34/204 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 FTPCVDDELEVK-RGQLVNILYRENDWVYVIGQDSRQEGFIPFSYCAPCNTQLADLAVKKKLPRE 131
            ::.|....:||| :|....::||.....|.: |...:|.|.|.|..:|....|..|..|..:..:
  Rat    51 YSACTVFVIEVKTKGGSKYLIYRRYRQFYAL-QSKLEERFGPESKNSPFTCSLPTLPAKVYMGVK 114

  Fly   132 QCPEQPIEENIPLLGTDNK------LDVLCDETL------NPGSANSIENTLL-----------V 173
            |   :..|..||.|....|      :.||.|..:      :...|..:...|.           |
  Rat   115 Q---EIAETRIPALNAYMKNLLSLPVCVLMDPDVRIFFYQSAYDAEQVPQALRRLRPRTRKIKGV 176

  Fly   174 EPECTPFVKEPSGRCIVLYTFIARDENDLSVERGEFVTVLNREDPDWFWIMRSDGQEGFVPASFI 238
            .|:.....:..:.|...|:.|....:.:||.:.|:.:.:|::.:.||. ...:.|..|..|.||:
  Rat   177 TPQGPSMDRMEAPRAEALFDFTGNSKLELSFKAGDVIFLLSKINKDWL-EGTTQGATGIFPGSFV 240

  Fly   239 -----YPAD 242
                 :|.|
  Rat   241 KILKDFPED 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlishNP_611251.2 SH3 61..111 CDD:212690 12/43 (28%)
SH3 184..238 CDD:214620 13/53 (25%)
SH3 293..346 CDD:212690
Ncf4XP_006242001.1 PX_p40phox 56..157 CDD:132792 25/104 (24%)
SH3_p40phox 190..243 CDD:212802 14/53 (26%)
PB1_P40 254..345 CDD:99721
Blue background indicates that the domain is not in the aligned region.

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