DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlish and Sh3rf3

DIOPT Version :10

Sequence 1:NP_611251.2 Gene:Dlish / 37014 FlyBaseID:FBgn0034264 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_017457292.1 Gene:Sh3rf3 / 294557 RGDID:1589772 Length:878 Species:Rattus norvegicus


Alignment Length:252 Identity:53/252 - (21%)
Similarity:101/252 - (40%) Gaps:48/252 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCPVRMRRDKKKATNASIERDLPAVGVLGMGRITGSSSIETLVRVGIEKEHGLSPDSKMVVLHDF 68
            :|| |.......|.:|....::.|..:.|....|.:|.:.|...:..    |..||.|       
  Rat   655 MCP-RPAIPFTSAASAITPPNVSAANLSGEVGGTPTSGLSTPSPINA----GYKPDDK------- 707

  Fly    69 TPCVDDELEVKRGQLVNILYRENDWVYVIGQDSRQEGFIPFSYCAPCNTQLA-DLAVKKKLPREQ 132
                .:|.:.|:..|:.:|         .|..::::...|.|.....:.|.| |.:::..:..|.
  Rat   708 ----KNEKKEKKSGLLKLL---------AGASTKKKARSPPSVSPTHDPQSAMDSSLQGAVGPEV 759

  Fly   133 CP--------EQPIEENI-------PLLGTDNKLDVLCDETLNPGSANSIENTLLVEPECTPFVK 182
            .|        ..|:|..:       ||......||:  :.:|:| |..:..:|..:.||..|..:
  Rat   760 SPLTIHGRAGSCPVESEMQGAIGLEPLHRKAGSLDL--NFSLSP-SRQATLSTASIRPEPKPLPR 821

  Fly   183 EPSGRCIVLYTFIARDENDLSVERGEFVTVLNREDPDWF-WIMRSDGQEGFVPASFI 238
            |   |..|:.::..:.|.::.::.|:.|.|..:.:..|| ..::.:|:.|..|.||:
  Rat   822 E---RYRVVVSYPPQSEAEIELKEGDIVFVHRKHEDGWFKGTLQRNGRTGLFPGSFV 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlishNP_611251.2 SH3 61..111 CDD:212690 7/49 (14%)
SH3 184..238 CDD:214620 12/54 (22%)
SH3 293..346 CDD:212690
Sh3rf3XP_017457292.1 RING-HC_SH3RF3 48..93 CDD:438408
SH3 191..244 CDD:473055
SH3 254..308 CDD:473055
SH3 462..518 CDD:473055
DUF5585 <516..831 CDD:465521 42/206 (20%)
SH3_SH3RF_C 823..877 CDD:212719 13/53 (25%)
Blue background indicates that the domain is not in the aligned region.

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