DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlish and Sh3d19

DIOPT Version :9

Sequence 1:NP_611251.2 Gene:Dlish / 37014 FlyBaseID:FBgn0034264 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_006501609.3 Gene:Sh3d19 / 27059 MGIID:1350923 Length:1211 Species:Mus musculus


Alignment Length:387 Identity:85/387 - (21%)
Similarity:138/387 - (35%) Gaps:131/387 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GMGRITGSSSIETLVRVGIEKEHGLSPDS------------KMVVLHDFTPCVDDELEVKRGQLV 84
            |.||:..|..  .:|....|:..|...||            ..|.||||.....|:|.:..|::|
Mouse   881 GTGRVHPSQM--KIVTPLDERPRGRPNDSGHSQKPVDSGAPHAVALHDFPAEQADDLSLTSGEIV 943

  Fly    85 NIL-------YREN----------DWVYVI-----GQDSRQEGFIPFSYCAPCNTQLADLAVKKK 127
            .:|       ||..          ::|.||     |:..::|.|  .|:||             |
Mouse   944 YLLEKIDAEWYRGKCRNQTGVFPANYVKVIVDIPEGRSGKRESF--SSHCA-------------K 993

  Fly   128 LPR---------EQCPEQPIEENIPLLGTD--------------------NKLDVLCDETLNPGS 163
            .||         :|..|....|...::.|:                    |.::::.|   :|.|
Mouse   994 GPRCVARFEYIGDQKDELSFSEGEVIILTEYVNEEWGRGEIRDRSGIFPLNFVELVGD---HPTS 1055

  Fly   164 ANSIENTLL------VEPECTPFVKEPSGR-CIVLYTFIARDENDLSVERGEFVTVLNREDPDWF 221
            ..:|.:|.:      .:|........|.|. |..|::|.|....||..:||:.:.:|.|.|.||:
Mouse  1056 GANILSTKVPPKTKNEDPGSNSQDSSPPGEWCKALHSFTAETSEDLPFKRGDRILILERLDSDWY 1120

  Fly   222 WIMRSDGQEGFVPASFIYPADSVRVLQQQKATLNAMETILQQGQQGQQSQQQQQPQLGLGTDDLR 286
             ..|...:||..||.|:.|..:     :.|...:|:                  |:         
Mouse  1121 -RGRLHDREGIFPAVFVQPCPA-----EAKGVASAI------------------PK--------- 1152

  Fly   287 YHGTELVMLYDYKAQAPDDLYLSVRRGDWIYADLTNQTVDGWLWAYAPKTRKYGFIPKAYAR 348
              |.::..|||:..:..|:  ||.:.|| :..:|  :.:|. .|.......:.|..||.|.:
Mouse  1153 --GRKVKALYDFLGENEDE--LSFKAGD-VITEL--EPIDD-AWMRGELMGRAGMFPKNYVQ 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlishNP_611251.2 SH3 61..111 CDD:212690 18/71 (25%)
SH3 184..238 CDD:214620 20/54 (37%)
SH3 293..346 CDD:212690 14/52 (27%)
Sh3d19XP_006501609.3 PHA03247 <50..375 CDD:223021
PTZ00449 <245..705 CDD:185628
SH3_Eve1_1 840..889 CDD:212748 3/7 (43%)
SH3 920..971 CDD:388381 12/50 (24%)
SH3_Eve1_3 996..1046 CDD:212750 6/49 (12%)
SH3 1086..1135 CDD:388381 18/49 (37%)
SH3 1155..1204 CDD:388381 14/54 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839796
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.