DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6424 and fam13b

DIOPT Version :10

Sequence 1:NP_611249.2 Gene:CG6424 / 37012 FlyBaseID:FBgn0028494 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001314971.1 Gene:fam13b / 568603 ZFINID:ZDB-GENE-030131-4913 Length:961 Species:Danio rerio


Alignment Length:874 Identity:203/874 - (23%)
Similarity:314/874 - (35%) Gaps:270/874 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SAFGQDRKLQRSNSEELLTEPAAIVSSTAQAAAELLEAQCEVIRRVSSEDFKRTASYANYRQEF- 163
            :.||.|.....::.|:|..:     .|.::..|||||.|.|.... ..||...|..|::...:. 
Zfish   172 AVFGPDIFHLDTDVEDLKEQ-----ESVSRILAELLENQEEFFES-EDEDISNTNDYSSINDQIT 230

  Fly   164 ----EREQEECSEL---GENN-------------------ASLANLP--------TGEAAKERPR 194
                |.:.:.|.||   ||:.                   ||::.||        |..||.|:..
Zfish   231 ELLEEEKLDACEELPRDGEDGPSSLSPKHAQVAPSSSSHIASISILPGSADIIQRTIRAAVEQHL 295

  Fly   195 LE------------------------TSPARQAP-----KEASDDSECEHERRRSSERFCKSRQP 230
            |:                        .||..:.|     ::...:||.|.|           ..|
Zfish   296 LDLQTSIDKELGSYESQVLDSKPIHGNSPTLKTPGPEDHEDVQSESEAETE-----------TLP 349

  Fly   231 PVRKSGVAKKVGGGS-GSKYLPSRRDEQSAYKYD---------LSALKYERRGFISSRKQQQNQT 285
            .|.:.|:..:....| ||:......:|.|....|         |.|.:.|:.    |..:|.:||
Zfish   350 EVTEEGLPSENSEESQGSQLSSPIMEESSGMDLDTETLIETESLGAERLEKH----SDYEQMDQT 410

  Fly   286 QAMQSAADHNDNNLIDFHQQQKELQSKRSASISPTPTTSSSAGS-------DDSTPTS------- 336
            .......|..|.|             ..|.|..|.....||..|       :.|.|.:       
Zfish   411 DVTTCEPDDCDLN-------------ANSESTEPASGFQSSTRSMFLEGEQEASCPINFPPIDFT 462

  Fly   337 --------NAPAPIKAKPQRQQQSLD-----LTSAQESLPWERGDEPAPILSRR---YAHSRPHI 385
                    |.|.|:....|.:.:|.:     |......||.|  ::..|:|:||   :.||:..:
Zfish   463 CMHLQREGNDPMPVFMSWQEETESGEAQLSPLAGRMMPLPLE--EDAHPLLARRFLDFGHSQRFL 525

  Fly   386 GGNLDAAAKLAKVMPYPQQLPKQASTVQLHSDITDMDCCLEPMDAVRAFSSLENMRTRDVMQQVL 450
            ..:.||:                :||..|        .|..|..|  :.||.::::..:|.||  
Zfish   526 QQDHDAS----------------SSTKTL--------SCGRPRRA--SLSSKDSVKGDNVSQQ-- 562

  Fly   451 PAMMGAFQTPEDRVKAINRRVTVLKKKLVQLEESLEQRLGYRPSQAERLNDKYMKNALAELSKLR 515
                            :.:::..||||:.|.:|..|:...|:||.|::..|..:...:.:|:|:|
Zfish   563 ----------------LTKKLQNLKKKIKQFDEQFEKERNYKPSHADKAADPKVLKWMTDLTKIR 611

  Fly   516 KE---RHEL------------------------KTDPIAALGLKVGS------------------ 535
            |:   ||.|                        ...|...|...:.|                  
Zfish   612 KQLKGRHHLLPKGSLRHQAVLQSYRCHSSSSSVPNTPHITLSRPLASRQSPHFYAKHKAESELTP 676

  Fly   536 -------------GGGAGIGGQEVAKKLE------RMKATLAEIEQNLNEKRVNGHRSEQLEDLN 581
                         |........|...::|      ..:.||..|:|.:..||......|.:..:.
Zfish   677 QTRPRSNTLPKSFGSTLDQSAYEDTVEIEARGHRPTREETLELIQQCIQSKRDEDGWPEDVRKMT 741

  Fly   582 ADQLVQEKSAVQHGLLYFESLYGHPITKEERDAARPLYDRYRQLKRLVSRTVMFGAGTGIPELPT 646
            .:||..||:.:|..|||:|.|:|.|:|:|||...:|||||||.:|::::|..:    |.|...|:
Zfish   742 KEQLASEKTVLQKNLLYYEGLHGRPVTREERLIVKPLYDRYRLVKQMLTRVSI----TPIIASPS 802

  Fly   647 ILEHEAMVFEATSTPLQYSSNNSTETTNSPSDSNAPNTLTQNASSDESTTTTTLTGPATGNSA-- 709
            ......|:.........:......|...........|...|:..||      .:..|....|:  
Zfish   803 SKRRNQMLQPIIEGETAHFCGEIEEEEEDEGRGQQENVEMQSECSD------IIMDPVAQPSSQH 861

  Fly   710 TSQENQAAS---------ENIAALSVDQLWEQLDRARDEKSLLKSTIREYESLFEEQNGRKMLKQ 765
            .:|||..:|         .:..|.|:.:|.|||.:||.||..|:.||||:|..|.:||||.:.|:
Zfish   862 PTQENILSSGKLNLDLRLSSTNASSMPELLEQLWKARAEKKKLRRTIREFEDEFYQQNGRNVQKE 926

  Fly   766 DRRSLETETYAQYKEKKAKVRLLQALIKK 794
            ||..:..| |.:||..|||:|||:.||.|
Zfish   927 DRLPMMDE-YKEYKRIKAKLRLLEVLISK 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6424NP_611249.2 PRK02224 <462..626 CDD:179385 55/227 (24%)
fam13bNP_001314971.1 RhoGAP_FAM13A1a 17..204 CDD:239858 10/36 (28%)
RecQL4_SLD2_NTD 566..615 CDD:412085 16/48 (33%)

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