DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgBbeta and lpin1a

DIOPT Version :10

Sequence 1:NP_611248.3 Gene:rdgBbeta / 37011 FlyBaseID:FBgn0027872 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_005158866.2 Gene:lpin1a / 799099 ZFINID:ZDB-GENE-080722-2 Length:920 Species:Danio rerio


Alignment Length:129 Identity:29/129 - (22%)
Similarity:49/129 - (37%) Gaps:41/129 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EKSWNYYPYTLTEYTCSFIPKLN----VLIKTKYEDNNGST-ENCLDLTEDELKVRTVD------ 138
            |.||.:      ..|.:::.:|.    |.:|..|...|.:| ..|:|:    :.||..|      
Zfish    18 ETSWTW------SQTMNYVGQLAGQVFVQVKELYRGLNPATLSGCIDV----IVVRQPDGTLQCS 72

  Fly   139 --H---------------LDIAFD-EVSAKHYKKEEDPK-FFKSEKTNRGPLIEGWRETDKPIM 183
              |               :||..: |..:.|.|..|:.: ||..|..:.|.::..:..| .||:
Zfish    73 PFHVRFGKMGVLRSREKVVDIEINGEPVSLHMKLGENGEAFFVKETEDDGEMVPSYLAT-SPII 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgBbetaNP_611248.3 SRPBCC 3..252 CDD:472699 29/129 (22%)
lpin1aXP_005158866.2 None

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