DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgBbeta and Lpin1

DIOPT Version :10

Sequence 1:NP_611248.3 Gene:rdgBbeta / 37011 FlyBaseID:FBgn0027872 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_038968123.1 Gene:Lpin1 / 313977 RGDID:1307646 Length:999 Species:Rattus norvegicus


Alignment Length:65 Identity:15/65 - (23%)
Similarity:27/65 - (41%) Gaps:19/65 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RLPYWIQAICPRVFYVIEKSWNYYPYTLTEYTCSFIPKLN----VLIKTKYEDNNGST-ENCLDL 127
            |.|.||:              |.:|..:...|.:::.:|.    |.:|..|:..|.:| ..|:|:
  Rat    32 RDPGWIR--------------NVWPSNINVQTMNYVGQLAGQVFVTVKELYKGLNPATLSGCIDI 82

  Fly   128  127
              Rat    83  82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgBbetaNP_611248.3 SRPBCC 3..252 CDD:472699 15/65 (23%)
Lpin1XP_038968123.1 Lipin_N 50..156 CDD:461356 8/33 (24%)
Lipin_mid 547..666 CDD:465292
LNS2 735..960 CDD:462403
Blue background indicates that the domain is not in the aligned region.

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