DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdgBbeta and Lpin1

DIOPT Version :10

Sequence 1:NP_611248.3 Gene:rdgBbeta / 37011 FlyBaseID:FBgn0027872 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_006515038.1 Gene:Lpin1 / 14245 MGIID:1891340 Length:1010 Species:Mus musculus


Alignment Length:65 Identity:14/65 - (21%)
Similarity:28/65 - (43%) Gaps:19/65 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RLPYWIQAICPRVFYVIEKSWNYYPYTLTEYTCSFIPKLN----VLIKTKYEDNNGST-ENCLDL 127
            |.|.||:::              :|..:...|.:::.:|.    |.:|..|:..|.:| ..|:|:
Mouse    43 RDPGWIRSV--------------WPSNINVQTMNYVGQLAGQVFVTVKELYKGLNPATLSGCIDI 93

  Fly   128  127
            Mouse    94  93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdgBbetaNP_611248.3 SRPBCC 3..252 CDD:472699 14/65 (22%)
Lpin1XP_006515038.1 Lipin_N 61..167 CDD:461356 8/33 (24%)
Lipin_mid 558..677 CDD:465292
LNS2 746..971 CDD:462403
Blue background indicates that the domain is not in the aligned region.

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