DRSC/TRiP Functional Genomics Resources

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Protein Alignment swi2 and ISLR2

DIOPT Version :9

Sequence 1:NP_611247.3 Gene:swi2 / 37010 FlyBaseID:FBgn0034262 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001123608.1 Gene:ISLR2 / 57611 HGNCID:29286 Length:745 Species:Homo sapiens


Alignment Length:220 Identity:46/220 - (20%)
Similarity:72/220 - (32%) Gaps:88/220 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 CTCL---MHHILPKTHIPLYTVNCSHLQFHRLPDFLPDNTTTLVINDNMI--------SDINPLR 325
            |.|:   .|..          .:|::.:...:|:.||.|.|||.::.|.|        :|:.   
Human    24 CACVDKYAHQF----------ADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFADVT--- 75

  Fly   326 DNPHYRHVVDMQLENNQISNVD-----------NLEDTY-------W-----LQNFRLLNLRGNN 367
                  .|..:.|.:|::..|:           ||:.::       |     |...:||.:..|.
Human    76 ------QVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFPWSDLRNLSALQLLKMNHNR 134

  Fly   368 LRKLHVYALDNALDD------NEN---------------ANLLLLSRNPWHCTCKFGSRMRELLT 411
            |..|...|| .||.|      |.|               .:.|.|..||:||.|..         
Human   135 LGSLPRDAL-GALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHNPFHCGCGL--------- 189

  Fly   412 KYKDIVRDAWNVSCTYRLDDDQLLA 436
                :...||..|....|.:...:|
Human   190 ----VWLQAWAASTRVSLPEPDSIA 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swi2NP_611247.3 LRR <117..384 CDD:227223 32/151 (21%)
leucine-rich repeat 132..154 CDD:275378
leucine-rich repeat 155..178 CDD:275378
leucine-rich repeat 179..201 CDD:275378
leucine-rich repeat 202..214 CDD:275378
leucine-rich repeat 287..307 CDD:275378 4/19 (21%)
leucine-rich repeat 308..332 CDD:275378 6/31 (19%)
leucine-rich repeat 333..357 CDD:275378 8/46 (17%)
leucine-rich repeat 358..385 CDD:275378 11/32 (34%)
leucine-rich repeat 386..398 CDD:275378 4/11 (36%)
ISLR2NP_001123608.1 leucine-rich repeat 36..52 CDD:275380 4/15 (27%)
LRR_8 52..109 CDD:404697 13/65 (20%)
LRR 1 52..73 6/20 (30%)
leucine-rich repeat 53..76 CDD:275380 6/31 (19%)
LRR 2 76..97 4/20 (20%)
leucine-rich repeat 77..100 CDD:275380 4/22 (18%)
LRR_8 99..159 CDD:404697 16/60 (27%)
LRR 3 100..123 3/22 (14%)
leucine-rich repeat 101..124 CDD:275380 4/22 (18%)
LRR 4 124..145 7/21 (33%)
leucine-rich repeat 125..148 CDD:275380 9/23 (39%)
LRR 5 148..169 3/20 (15%)
leucine-rich repeat 149..172 CDD:275380 2/22 (9%)
PCC 154..>228 CDD:188093 14/70 (20%)
Ig_3 232..359 CDD:404760
Ig strand B 256..263 CDD:409353
Ig strand C 269..274 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..326
Ig strand C' 305..307 CDD:409353
Ig strand D 331..335 CDD:409353
Ig strand E 338..343 CDD:409353
Ig strand F 351..359 CDD:409353
Ig strand G 362..372 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..466
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 656..722
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24366
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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