DRSC/TRiP Functional Genomics Resources

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Protein Alignment swi2 and islr2

DIOPT Version :9

Sequence 1:NP_611247.3 Gene:swi2 / 37010 FlyBaseID:FBgn0034262 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001120371.1 Gene:islr2 / 100145445 XenbaseID:XB-GENE-5920691 Length:691 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
swi2NP_611247.3 LRR <117..384 CDD:227223
leucine-rich repeat 132..154 CDD:275378
leucine-rich repeat 155..178 CDD:275378
leucine-rich repeat 179..201 CDD:275378
leucine-rich repeat 202..214 CDD:275378
leucine-rich repeat 287..307 CDD:275378
leucine-rich repeat 308..332 CDD:275378
leucine-rich repeat 333..357 CDD:275378
leucine-rich repeat 358..385 CDD:275378
leucine-rich repeat 386..398 CDD:275378
islr2NP_001120371.1 leucine-rich repeat 36..52 CDD:275380
LRR_8 51..111 CDD:290566
LRR_4 52..92 CDD:289563
leucine-rich repeat 53..76 CDD:275380
LRR_4 75..115 CDD:289563
leucine-rich repeat 77..100 CDD:275380
LRR_8 100..159 CDD:290566
leucine-rich repeat 101..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..172 CDD:275380
LRRCT 181..>219 CDD:214507
IG_like 251..341 CDD:214653
Ig 254..338 CDD:143165
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24366
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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