DRSC/TRiP Functional Genomics Resources

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Protein Alignment HPS4 and hps4

DIOPT Version :9

Sequence 1:NP_611246.1 Gene:HPS4 / 37009 FlyBaseID:FBgn0034261 Length:858 Species:Drosophila melanogaster
Sequence 2:NP_956620.1 Gene:hps4 / 393296 ZFINID:ZDB-GENE-040426-1068 Length:647 Species:Danio rerio


Alignment Length:884 Identity:169/884 - (19%)
Similarity:287/884 - (32%) Gaps:302/884 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QTSILTERETMIVFVYDTECLTDEADDPISAVLYFHPSWVSDSQKVALCGQLMGTSYFLKDCFFN 85
            ::::|.:......|:||:..:.:|.|.....:.||:|......|:..|||||.|....:.:...:
Zfish     3 ESAVLADSRRCCFFLYDSSKVQEEGDLTRDGIYYFYPEDTPIDQQELLCGQLAGVCRCVSELSSS 67

  Fly    86 P-RILALQNGKFVLKEFGRFILAIGTDRNIGDQLLEHRADLLSSLLKFFHRDVQTLYAQYAAPPA 149
            | |:|.|:..|:.::....|:.|:.....|.|..:....|.|.:|..|::..|:..|..|:    
Zfish    68 PVRLLRLRKSKYAVRMKDNFLWALSCSVEIPDVSICDVLDQLIALFCFYNGPVRQSYQLYS---- 128

  Fly   150 LNRRNLSEKLYHIFETYLPMLQRNGNT-----FQNVPRLRMPKTASHIFLEAIQTLQSCQQTKGI 209
                  .|:|...:..||..|| .|:|     |..:..:........:.|:|...||:||:...:
Zfish   129 ------QEELALRWARYLHHLQ-GGSTELHSIFSCLRTIDSTNIDPLLLLKAALILQACQRCPLV 186

  Fly   210 LGGAILYHNKVVASQLSDMVTKHLVLTDPLHIRTAAEQVTNHPEFHIPNGVQMLV---------- 264
            |.|.|||..:|:::|:...:|..:::.:     |......|....   ||:...|          
Zfish   187 LAGCILYRGRVMSTQMPPALTVKVMVYE-----TQTYSQDNRVSV---NGLSSSVGSAASVTVTT 243

  Fly   265 -VYLEHMQYRQL-AGEAQRAQNLQMNTAQLTQNGMPFQYAKRKIKRDKSLIFTHIPEEEHAPEQQ 327
             |||...:...: :...:||.....|..       |.|..|.::.|..|    ..|..:......
Zfish   244 QVYLTPSELNMIRSPPVERACRSHCNPP-------PCQPRKSRLSRTLS----DTPTSDTDSSSL 297

  Fly   328 GAVEQLPPARPKSMRPTHLPLRIKSMQSKELPESGIASINFDETDSYPQFIGRTSVCNTPMTENK 392
            .|: |.||...::|                 |.|..:|:: ||    |.|....|..|||:..|.
Zfish   298 DAL-QCPPVSYQTM-----------------PSSPRSSLS-DE----PYFSPSPSRGNTPLHSNL 339

  Fly   393 VLPVANVMSICANPEDEGKEEDIHNSNGKTHSRRNSLKVDVEKFFQNFISNPNKQLT---RRKSS 454
            :                 .:.:..||  ::|..:.:||              .:.||   .||..
Zfish   340 L-----------------NQSEYFNS--ESHDHQTALK--------------EQSLTESLNRKQD 371

  Fly   455 ADLQDALRAISKKLNN-----------FTHGLKTDVN---RNGSGNGDVSSDSPDFIEDDDKITS 505
            .|......:.|:.||:           .|:|.: ::|   .:.|.|.:....:.|.:|.|..:||
Zfish   372 TDTNSESESKSEGLNSDQDVQSEEIKALTNGFQ-ELNSHENHASDNDEQIQSTADKLESDSHVTS 435

  Fly   506 RTISDPTYPVFNTNGQQISRSLFQQ----FLDQYRKLWGVASEQAHEDAEL-------------- 552
            :.        ....|:..:|::.:|    ..|:|:....::..:..||..|              
Zfish   436 KN--------GKLRGEMEARTMSKQADRRHQDKYKPTSRLSPNETTEDPSLLPSILYQHRVRGLV 492

  Fly   553 AALVAEFQEFNAEIQKLDEHMRQQAAEASSADRNLNVSAAKTPLDKRSMTLPLKSAGESTFGERA 617
            .||:.| .|||.     |...|::...:|.|..|                           |..|
Zfish   493 LALLVE-PEFNT-----DPAAREEVQHSSLASLN---------------------------GLEA 524

  Fly   618 SGRSGAGGVPLTPLMAKLSVLALSETTPIEIQTPLTTSKVFPRRSSLKCEDAVDALAALTTAPAQ 682
            ..|:.:.|.|                                                      .
Zfish   525 HLRNTSQGTP------------------------------------------------------G 535

  Fly   683 PPGPIQPDGLQRTELYICGQQNMTLLLLMEEGTCQQQQVVQKMFDICVAKFPHMESQLNQTLNVN 747
            ||||.                                            .|.|.:. :..||..|
Zfish   536 PPGPY--------------------------------------------TFAHYDC-IQNTLTTN 555

  Fly   748 VEGDNRDGSNYSFMCVDSKWDVLQRNGPWNPLELNILESMHSIHSSGHHLTDLILRSNDSVYYGH 812
            |.|                    :..||.:...|.....:||..|....|.:.|:|::.|..|..
Zfish   556 VCG--------------------RSVGPQDRAFLRATALLHSHFSHLDTLQEAIVRNSGSAVYAT 600

  Fly   813 KNGRTE-FFYKEPTHQIN-GIPPPSDPIGNIQSRAKSRL 849
            ::...| :|.::.|...| |.|.|.|...::..:|:.||
Zfish   601 RSTAQETYFLQQGTPVRNSGSPDPQDSAFSLPRKARQRL 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HPS4NP_611246.1 None
hps4NP_956620.1 DUF1712 15..>127 CDD:254668 30/111 (27%)
OspD 337..>477 CDD:281234 31/181 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595817
Domainoid 1 1.000 74 1.000 Domainoid score I9067
eggNOG 1 0.900 - - E1_28K4F
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5264
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008034
OrthoInspector 1 1.000 - - oto41453
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14407
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4898
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.970

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