Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009304469.2 | Gene: | sema3fb / 799945 | ZFINID: | ZDB-GENE-050513-2 | Length: | 791 | Species: | Danio rerio |
Alignment Length: | 596 | Identity: | 188/596 - (31%) |
---|---|---|---|
Similarity: | 295/596 - (49%) | Gaps: | 76/596 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 MLVNAI-PMILLITLSGLTIVAGWMPDVKP-------DLQTKQDKVLAHFIGNSTDYFKIL--DH 66
Fly 67 NDEFVLVGAKDVIYNVSLNGL-KEIARLEWHSTDADRELCALKGKH-EWDCHNYLRVYALRPNGE 129
Fly 130 VLLCGTNSYKPRCRH-------YTPVEVSSEEA-GSAGHA--------------HAMRYEVSRDV 172
Fly 173 EAQGLCPYSPAHNSTYAFADGHLYSATVADFSGGDPLIYR---EN--LRTEQYDLKQLNQPDFV- 231
Fly 232 -----GAIERNGYVL-FFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNC 290
Fly 291 SVPGE--FPFYFDEIQ--AISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFK 351
Fly 352 SQKDSQSHWLPVEREQVPKPRPGQC--------VEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRP 408
Fly 409 LLTKVNLHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKT--VVI 471
Fly 472 SEMQVLPLGTPIRELVISTSKNSLVVVSDGSLVSVPLHHCSHIVD-CLGCLSLQDPICAWDLQTH 535
Fly 536 ECKNLATSQHK 546 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 161/507 (32%) |
PSI | 510..>537 | CDD:214655 | 9/27 (33%) | ||
sema3fb | XP_009304469.2 | Sema_3F | 48..547 | CDD:200515 | 162/511 (32%) |
PSI | 546..>582 | CDD:214655 | 12/38 (32%) | ||
Ig_Semaphorin_classIII | 612..700 | CDD:143279 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |