Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005168979.2 | Gene: | sema4bb / 561146 | ZFINID: | ZDB-GENE-120503-1 | Length: | 849 | Species: | Danio rerio |
Alignment Length: | 849 | Identity: | 223/849 - (26%) |
---|---|---|---|
Similarity: | 362/849 - (42%) | Gaps: | 172/849 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 IVAGWMPDVKPDLQTKQDKVLAHFI------GNSTDYFKI----------LDHNDEFVLVGAKDV 78
Fly 79 IYNVSLNGLKEIARLE----WHSTDADRELCALKGKH-EWDCHNYLRVYALRPNGEVLLCGTNSY 138
Fly 139 KPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGHLYSATVADF 203
Fly 204 SGGDPLIYRE-----NLRTEQYDLKQLNQPDFVGAI-------ERN-GYVLFFFRELSMEVMNFG 255
Fly 256 KAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGE-FPFYFDEIQAISPIVESGSKSLIY 319
Fly 320 AVFTT--SVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQC------ 376
Fly 377 ---VEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDV 438
Fly 439 IYSGTDDGKVTKFINILS-THPNSTVDRLKTVVISEMQVLPLGTPIRELVISTSKNSLVVVSDGS 502
Fly 503 LVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTYLQSLNSTKKAAALL- 566
Fly 567 ----CPHIPRDAPGAETVSFVTMAPPPTEEQKLLYSNVGSSQGN-----QPSLEQQPTGGDDFGL 622
Fly 623 NKITLTSMDPDDIMPNLN----------------DPQKSTASVDEIKYASTPSFMLLTTIVFFTF 671
Fly 672 LVGGIAGICCVKAKSRLMEAQMDESHRNH----------------------FGKPMQFKHQNTGK 714
Fly 715 DINLLMGSNAYTTTQKT---PNLDLEKDRSHECKNSTEH-----LEKE-----LPCKTSTLTKVK 766
Fly 767 RTYI 770 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 158/496 (32%) |
PSI | 510..>537 | CDD:214655 | 11/26 (42%) | ||
sema4bb | XP_005168979.2 | Sema_4B | 61..520 | CDD:200518 | 156/489 (32%) |
PSI | 521..570 | CDD:307546 | 12/50 (24%) | ||
Ig | 596..670 | CDD:325142 | 10/75 (13%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |