Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005166611.1 | Gene: | sema4f / 556003 | ZFINID: | ZDB-GENE-130530-860 | Length: | 797 | Species: | Danio rerio |
Alignment Length: | 677 | Identity: | 174/677 - (25%) |
---|---|---|---|
Similarity: | 289/677 - (42%) | Gaps: | 137/677 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 VNAIPMILLITLSGLTIVAGWMPDVK------PDLQTKQDKVLAHFIGNSTDYFKILDHNDEFVL 72
Fly 73 -VGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGKHEWDCHNYLRVYALRPNGEVLLCGTN 136
Fly 137 SYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGHLYSATVA 201
Fly 202 DFSG---------GDPLIYRENLRTEQYDLKQLNQPDFVGA--IERNG---------YVLFFFRE 246
Fly 247 LSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCS--VPGEFPFYFDEIQAISPI 309
Fly 310 VESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPG 374
Fly 375 QCV---------EDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKS 430
Fly 431 LSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPIRELVISTSKNSL 495
Fly 496 VVVSDGSLVSVPLHHCSHIVDC--------LGCLSLQD-PICAW----------DL--QTHECKN 539
Fly 540 LATS---------------------------QHKFGTKT----YLQSLNSTKKAAAL---LCPHI 570
Fly 571 PRDAPGA-ETVSFVTMAPPPTEEQKLL 596 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 140/487 (29%) |
PSI | 510..>537 | CDD:214655 | 12/47 (26%) | ||
sema4f | XP_005166611.1 | Sema | 36..490 | CDD:301699 | 139/496 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |