Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001243276.1 | Gene: | SEMA5B / 54437 | HGNCID: | 10737 | Length: | 1205 | Species: | Homo sapiens |
Alignment Length: | 608 | Identity: | 207/608 - (34%) |
---|---|---|---|
Similarity: | 312/608 - (51%) | Gaps: | 88/608 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SRPSSAAMLVNAIPMILLITLSGLTIVAGWM---PDVKPDLQTKQD------------KVLAHFI 54
Fly 55 GNST-----DYFKI-LDHNDEFVLVGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGKHEW 113
Fly 114 DCHNYLRVYALRPNGEVLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVE-AQGL 177
Fly 178 --CPYSPAHNSTYAF-ADGHLYSATVADFSGGDPLIYRE-----NLRTEQYDLKQLNQPDFVGAI 234
Fly 235 ERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFY 299
Fly 300 FDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVE 364
Fly 365 REQVPKPRPGQCVE--DSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTK--VNLHHRLTAIAVH 425
Fly 426 PQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDR-LKTVVISEMQVLPLG--TPIRELV 487
Fly 488 ISTSKNSLVVVSDGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTY 552
Fly 553 LQSLNSTKKAAALLCP--HIPRD 573 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 180/477 (38%) |
PSI | 510..>537 | CDD:214655 | 8/26 (31%) | ||
SEMA5B | NP_001243276.1 | Sema_5B | 172..608 | CDD:200525 | 178/473 (38%) |
PSI | 609..656 | CDD:279745 | 12/57 (21%) | ||
TSP1 | 667..718 | CDD:214559 | |||
TSP1 | 721..774 | CDD:214559 | |||
TSP1 | 779..825 | CDD:214559 | |||
TSP1 | 910..962 | CDD:214559 | |||
TSP1 | 967..1019 | CDD:214559 | |||
TSP_1 | 1023..1064 | CDD:278517 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |