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Protein Alignment Sema1b and sdf2l1
DIOPT Version :9
Sequence 1: | NP_001163178.1 |
Gene: | Sema1b / 37007 |
FlyBaseID: | FBgn0016059 |
Length: | 770 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001008033.1 |
Gene: | sdf2l1 / 493395 |
XenbaseID: | XB-GENE-970744 |
Length: | 218 |
Species: | Xenopus tropicalis |
Alignment Length: | 106 |
Identity: | 27/106 - (25%) |
Similarity: | 46/106 - (43%) |
Gaps: | 25/106 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 KILD--HNDEFVLVGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGKHEWDCHNYLRVYAL 124
|:|: || |.:.:.||.|. |.:|.:.:..:| ::|.......::||.:.||
Frog 39 KLLNSRHN---VRLHSHDVKYG-SGSGQQSVTGVE--ASDDANSYWRIRGKTDADC--------- 88
Fly 125 RPNGEVLLCG-------TNSYKPRCRHYTPVEVSSEEAGSA 158
..||.:.|| .|:.|....|:.|..:|:.:..||
Frog 89 -SRGEPIKCGQAVRLTHVNTGKNLHTHHFPSPLSNNQEVSA 128
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Sema1b | NP_001163178.1 |
Sema_1A |
55..511 |
CDD:200498 |
27/106 (25%) |
PSI |
510..>537 |
CDD:214655 |
|
sdf2l1 | NP_001008033.1 |
PMT1 |
<49..>209 |
CDD:224839 |
22/93 (24%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3611 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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