Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001073411.1 | Gene: | Sema3b / 363142 | RGDID: | 1310079 | Length: | 749 | Species: | Rattus norvegicus |
Alignment Length: | 561 | Identity: | 176/561 - (31%) |
---|---|---|---|
Similarity: | 280/561 - (49%) | Gaps: | 61/561 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 RPSSAAMLVNAIPMILLITLSGLTIVAGWMPDVKPDLQTKQDK--VLAHFIGNSTDYFKIL-DHN 67
Fly 68 DEFVLVGAKDVIYNVSLNGL-KEIARLEWHSTDADRELCALKGKH-EWDCHNYLRVYALRPNGEV 130
Fly 131 LLCGTNSYKPRCRHYTPVEVSSEEAGSAGH---AHAMRYEVSRDVEAQGLCPYSPAHNSTYAFAD 192
Fly 193 GHLYSATVADFSGGDPLIYRE-----NLRTEQYDLKQLNQPDFVGAI-------ERNGYVLFFFR 245
Fly 246 ELSMEVM-NFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPG-EFPFYFDEIQAISP 308
Fly 309 IVESGSKS--LIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKP 371
Fly 372 RPGQCVEDSRTLTSIA---------VNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQ 427
Fly 428 VKSLSGAYYDVIYSGTDDGKVTKFINI-LSTHPNSTVDRLKTVVISEMQVLPLGTPIRELVISTS 491
Fly 492 KNSLVVVSDGSLVSVPLHHCSHI-VDCLGCLSLQDPICAWD 531 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 154/487 (32%) |
PSI | 510..>537 | CDD:214655 | 9/23 (39%) | ||
Sema3b | NP_001073411.1 | Sema | 46..516 | CDD:301699 | 154/491 (31%) |
PSI | 515..>551 | CDD:214655 | 9/23 (39%) | ||
Ig | 575..665 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.910 |