Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571136.1 | Gene: | sema3ab / 30267 | ZFINID: | ZDB-GENE-991209-6 | Length: | 778 | Species: | Danio rerio |
Alignment Length: | 710 | Identity: | 206/710 - (29%) |
---|---|---|---|
Similarity: | 324/710 - (45%) | Gaps: | 116/710 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 MPDVKP---DLQTKQDKVLAHFIGNSTDYFK-ILDHNDEFVLVGAKDVIYNVSLNGLKEIARL-E 94
Fly 95 WHSTDADRELCALKGKH-EWDCHNYLRVYALRPNGEVLL--CGTNSYKPRCRHYTPVEVSSEEAG 156
Fly 157 SAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGHLYSATVADFSGGDPLIYR-----ENLR 216
Fly 217 TEQYDLKQLNQPDFVGA-------IERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPY 274
Fly 275 SHGKSWTSFLKARLNCSVPG--EFPFYFDEIQAISPIVESGSKS-LIYAVFTTSVNAIPGSAVCA 336
Fly 337 FNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQC-------VEDSRTLTSIAVNFIKNH 394
Fly 395 PLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHP 459
Fly 460 NSTVDRLKTVVISEMQVLPLGTPIRELVISTSKNSLVVVSDGSLVSVPLHHCS-HIVDCLGCLSL 523
Fly 524 QDPICAWDLQTHEC-KNLATSQHKFGTK-----------TYLQSLNSTKKAAALLCPHIPRDAPG 576
Fly 577 AE-TVSFVTMAPPPT------------EEQKLLYSN----VGSSQGNQ-PSLEQQPTG------- 616
Fly 617 --GDDFGLNKITLTSMDP---DDIM----PNLNDPQK---------------STASVDEI 652 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 158/482 (33%) |
PSI | 510..>537 | CDD:214655 | 9/27 (33%) | ||
sema3ab | NP_571136.1 | Sema | 27..519 | CDD:301699 | 161/506 (32%) |
PSI | 517..>553 | CDD:214655 | 11/37 (30%) | ||
Ig_Semaphorin_classIII | 583..673 | CDD:143279 | 21/93 (23%) | ||
IG_like | 586..654 | CDD:214653 | 15/67 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 727..778 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |