Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_571123.2 | Gene: | sema3d / 30250 | ZFINID: | ZDB-GENE-990715-2 | Length: | 764 | Species: | Danio rerio |
Alignment Length: | 523 | Identity: | 167/523 - (31%) |
---|---|---|---|
Similarity: | 266/523 - (50%) | Gaps: | 56/523 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 KVLAH------FIGNST-DYFK--ILDHNDEFVLVGAKDVIYNVSLNGL-KEIARLEWHSTDADR 102
Fly 103 ELCALKGKHE-WDCHNYLRVYALRPNGEVLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRY 166
Fly 167 EVSRDVEAQGLCPYSPAHNSTYAFADGHLYSATVADFSGGD--------PLIYRENLRTEQYDLK 223
Fly 224 QLNQPDFVGA-------IERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWT 281
Fly 282 SFLKARLNCSVPGE--FPFYFDEIQAISPIVESGSKS-LIYAVFTTSVNAIPGSAVCAFNVDDIL 343
Fly 344 AAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQC--------VEDSRTLTSIAVNFIKNHPLMEEA 400
Fly 401 VPAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDR 465
Fly 466 LKTVVISEMQVLPLGTPIRELVISTSKNSLVVVSDGSLVSVPLHHCSHIV--DCLGCLSLQDPIC 528
Fly 529 AWD 531 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 152/486 (31%) |
PSI | 510..>537 | CDD:214655 | 11/24 (46%) | ||
sema3d | NP_571123.2 | Sema_3D | 65..538 | CDD:200513 | 153/488 (31%) |
PSI | 537..589 | CDD:214655 | 11/24 (46%) | ||
Ig_Semaphorin_classIII | 599..689 | CDD:143279 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 743..764 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |