Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006244820.1 | Gene: | Sema4c / 301346 | RGDID: | 1562837 | Length: | 856 | Species: | Rattus norvegicus |
Alignment Length: | 673 | Identity: | 192/673 - (28%) |
---|---|---|---|
Similarity: | 298/673 - (44%) | Gaps: | 111/673 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 AAMLVNAIPMILLITLSGLTIVAGWMPDVKP-------DLQTKQDKVLAHFIGNSTDYFKILDHN 67
Fly 68 DE--FVLVGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGK-HEWDCHNYLRVYALRPNGE 129
Fly 130 VLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAFADGH 194
Fly 195 LYSATVADFSGGDPLIYR-----ENLRTEQYDLKQLNQPDFVGAI---ERNG-------YVLFFF 244
Fly 245 RELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQAISPI 309
Fly 310 V-ESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRP 373
Fly 374 GQCVED---------SRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTK--VNLHHRLTAIAVHPQ 427
Fly 428 VKSLSGAYYDVIYSGTDDGKVTKFINILS-THPNSTVDRLKTVVISEMQVLPLGTPIRELVISTS 491
Fly 492 KNSLVVVSDGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTYLQSL 556
Fly 557 NSTKKAAALLCPHIPRDAPGAETVSFVTMAPPPTEEQKL-------------LYSNVGSS----Q 604
Fly 605 GNQPSLEQQPTGGDDFGLNKITL 627 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 152/486 (31%) |
PSI | 510..>537 | CDD:214655 | 9/26 (35%) | ||
Sema4c | XP_006244820.1 | Sema_4C | 64..520 | CDD:200519 | 152/489 (31%) |
PSI | 521..>550 | CDD:214655 | 10/30 (33%) | ||
IG_like | 585..659 | CDD:214653 | 9/53 (17%) | ||
Ig | 586..670 | CDD:299845 | 9/52 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |