Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258953.1 | Gene: | Sema6c / 20360 | MGIID: | 1338032 | Length: | 963 | Species: | Mus musculus |
Alignment Length: | 732 | Identity: | 236/732 - (32%) |
---|---|---|---|
Similarity: | 340/732 - (46%) | Gaps: | 137/732 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 MILLITLSGLTIVAGWMP-DVKP----DLQTK---------QDKVLAHFIGNSTDYFKILDHNDE 69
Fly 70 FVLVGAKDVIYNVSL------NGLKEIARLEWHSTDADRELCALKGKHEWDCHNYLRVYALRP-N 127
Fly 128 GEVLL-CGTNSYKPRCRHY--TPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYA 189
Fly 190 FADGHLYSATVADFSGGDPLIYRE-----NLRTEQYDLKQLNQPDFVGAIERNGYVLFFFRELSM 249
Fly 250 EVMNFGKAVYSRVARVCKNDRGG-PYSHGKSWTSFLKARLNCSVPGEFPFYFDEIQAISPIVESG 313
Fly 314 SKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQCV- 377
Fly 378 -------EDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQ--VKSLSG 433
Fly 434 AYYD--VIYSGTDDGKVTKFI----NILSTHPNSTVDRLKTVVISEMQVLP-----------LGT 481
Fly 482 PIRELVISTSKNSLVVVSDGSLVSVPLHHCSHIVDC-LGCLSLQDPICAWDLQTHECKNLATSQH 545
Fly 546 KFGTKTYLQ-SLNSTKKAAALLCPHIPRDAPGAETVSFVTMAPPPTEEQKLLYSNVGSSQGNQPS 609
Fly 610 LEQQPTGGDDFGLNKITLTSMDPDDIMPNLNDPQKSTASVDEIKYASTPSFMLLTTIVFFTFLVG 674
Fly 675 GIAGI----CCVKAKSR 687 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 183/498 (37%) |
PSI | 510..>537 | CDD:214655 | 9/27 (33%) | ||
Sema6c | NP_001258953.1 | Sema | 54..518 | CDD:387663 | 183/503 (36%) |
PSI | 519..>540 | CDD:214655 | 7/20 (35%) | ||
PHA03247 | <714..956 | CDD:223021 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 317 | 1.000 | Domainoid score | I1262 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 370 | 1.000 | Inparanoid score | I2107 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8703 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101616 | |
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X415 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.860 |