Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006495867.1 | Gene: | Sema4c / 20353 | MGIID: | 109252 | Length: | 943 | Species: | Mus musculus |
Alignment Length: | 675 | Identity: | 199/675 - (29%) |
---|---|---|---|
Similarity: | 312/675 - (46%) | Gaps: | 103/675 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 KSRPSSAAMLVNAIPMILLITLSGLTIVAGWMPDVKP-------DLQTKQDKVLAHFIGNSTDYF 61
Fly 62 KIL---DHNDEFVLVGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGK-HEWDCHNYLRVY 122
Fly 123 ALRPNGEVLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNST 187
Fly 188 YAFADGHLYSATVADFSGGDPLIYR-----ENLRTEQYDLKQLNQPDFVGAI---ERNG------ 238
Fly 239 -YVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFPFYFDE 302
Fly 303 IQAISPI-VESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLPVERE 366
Fly 367 QVPKPRPGQCVED---------SRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTK--VNLHHRLT 420
Fly 421 AIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILS-THPNSTVDRLKTVVISEMQVLPLGTPIR 484
Fly 485 ELVISTSKNSLVVVSDGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGT 549
Fly 550 --KTYLQSLNSTKKAAALLCPHI----PRDAPGAETVSFVTMAPPPTEEQKLLYSNVGSSQ---G 605
Fly 606 NQPSLEQQPTGGD---DFGLNKITL 627 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 150/487 (31%) |
PSI | 510..>537 | CDD:214655 | 9/26 (35%) | ||
Sema4c | XP_006495867.1 | Sema_4C | 151..607 | CDD:200519 | 150/490 (31%) |
PSI | 608..>637 | CDD:214655 | 10/30 (33%) | ||
Ig | 673..757 | CDD:386229 | 15/58 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |