Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379344.1 | Gene: | smp-1 / 173351 | WormBaseID: | WBGene00004889 | Length: | 714 | Species: | Caenorhabditis elegans |
Alignment Length: | 671 | Identity: | 230/671 - (34%) |
---|---|---|---|
Similarity: | 343/671 - (51%) | Gaps: | 101/671 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 IGNS---TDYFKILDHNDEFVLVGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALKGKHEWDC 115
Fly 116 HNYLRVYALRPNGEVLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPY 180
Fly 181 SPAHNSTYAFADG--HLYSATVADFSGGDPLIYRE------------NLRTEQYDLKQLNQPDFV 231
Fly 232 GAIERNGYVLFFFRELSMEVM--NFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVP- 293
Fly 294 GEFPFYFDEIQAISPIVESGSKS-LIYAVFTTSVNAIPGSAVCAFNVDDILAAFD-GEFKSQKDS 356
Fly 357 QSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTA 421
Fly 422 IAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPIREL 486
Fly 487 VISTSKNSLVVVSDGSLVSVPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKT 551
Fly 552 YLQSLNSTKKAAALLCPH--IPRDA---------PGA----------ETVSFVTMAPPPTEEQKL 595
Fly 596 LYSNVGS-----------SQGNQPSLEQQPTGG---DDFGLNKIT----LTSMDPDD--IMPNLN 640
Fly 641 DPQKSTASVDEIKYASTPSFM 661 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 187/477 (39%) |
PSI | 510..>537 | CDD:214655 | 11/26 (42%) | ||
smp-1 | NP_001379344.1 | Sema_1A | 49..497 | CDD:200498 | 185/474 (39%) |
PSI | 496..547 | CDD:214655 | 15/57 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 324 | 1.000 | Domainoid score | I645 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG28691 | |
OrthoDB | 1 | 1.010 | - | - | D231201at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm14671 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101616 | |
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X415 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.930 |