Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_490875.1 | Gene: | mab-20 / 171727 | WormBaseID: | WBGene00003111 | Length: | 658 | Species: | Caenorhabditis elegans |
Alignment Length: | 521 | Identity: | 143/521 - (27%) |
---|---|---|---|
Similarity: | 237/521 - (45%) | Gaps: | 73/521 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 63 ILDHNDEFVLVGAKDVI-----YNVSLNGLKEIARLEWHSTDADRELCALKGKHEWDCHNYLRVY 122
Fly 123 ALRPN-GEVLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNS 186
Fly 187 TYAFADG-------HLYSATVADFSGGDPLIYR-----------ENLRTEQYDLKQLNQPDFVGA 233
Fly 234 IERNGYVLFFFRELSMEVMNFG-KAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFP 297
Fly 298 FYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWLP 362
Fly 363 VEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQ 427
Fly 428 VKSLSGAYYDVIYS-GTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPIRELVISTS 491
Fly 492 KNSLVVVSDGSLVS-VPLHHCSHIVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGTKTYLQS 555
Fly 556 L 556 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 127/474 (27%) |
PSI | 510..>537 | CDD:214655 | 10/26 (38%) | ||
mab-20 | NP_490875.1 | Sema_2A | 34..477 | CDD:200499 | 127/472 (27%) |
PSI | 478..521 | CDD:279745 | 16/47 (34%) | ||
IGc2 | <556..596 | CDD:197706 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |