DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema1b and AgaP_AGAP005742

DIOPT Version :9

Sequence 1:NP_001163178.1 Gene:Sema1b / 37007 FlyBaseID:FBgn0016059 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_001688723.1 Gene:AgaP_AGAP005742 / 1276412 VectorBaseID:AGAP005742 Length:769 Species:Anopheles gambiae


Alignment Length:781 Identity:348/781 - (44%)
Similarity:478/781 - (61%) Gaps:86/781 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PDLQTKQDKVLAHFIGNSTDYFKILDHNDEFVLVGAKDVIYNVSLNGLKEI--ARLEWHSTDADR 102
            |.:....:..:..|.||||||||:||.|::::|:||::.:||:|::.|.|:  .|:.|.|:||.|
Mosquito    14 PKIAIVGNATVPSFFGNSTDYFKLLDANEQYILIGARNAVYNISIDRLVELPGQRISWPSSDAHR 78

  Fly   103 ELCALKGKHEWDCHNYLRVYALRPNGEVLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYE 167
            |||.||||||.||.||:||:|......:::|||||:||.||:|..:..:.          ::.|:
Mosquito    79 ELCTLKGKHEQDCQNYIRVFARINANRIMVCGTNSFKPLCRYYNVLPGNG----------SLVYD 133

  Fly   168 VSRDVEAQGLCPYSPAHNSTYAFADGHLYSATVADFSGGDPLIYRENLRTEQYDLKQLNQPDFVG 232
             :.::||||.|||:|.|||||.:.||.|||||||||||.|.|||||..||||:|.||||||.||.
Mosquito   134 -NNELEAQGRCPYNPQHNSTYVYTDGQLYSATVADFSGADALIYREPQRTEQFDSKQLNQPAFVS 197

  Fly   233 AIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEFP 297
            |||.||||:||:||::||.||.|||:||||:||||||:||||.....||||||||||||:|||:|
Mosquito   198 AIEYNGYVMFFYREVAMEYMNCGKAIYSRVSRVCKNDKGGPYPFQDKWTSFLKARLNCSIPGEYP 262

  Fly   298 FYFDEIQAISPIVESGS-----KSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQ 357
            |||||:||.:..: ||:     ..:||.:.||..|||.|||||||:|:||:.||:|.||:|:|..
Mosquito   263 FYFDELQATTNAI-SGTYGGVRNKIIYGIMTTPENAIGGSAVCAFSVEDIMEAFEGPFKAQRDIH 326

  Fly   358 SHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAI 422
            |:||.|....||:||||:||:|||||....|||:|.:.||:.:||:||.||:.|:|:|::||:||
Mosquito   327 SNWLQVPPSAVPEPRPGKCVDDSRTLPKALVNFVKTNNLMDSSVPSVHSRPVFTRVSLYYRLSAI 391

  Fly   423 AVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPIRELV 487
            ||.||||:|.|..||||:.||:||||.||:||||.   :|.|.::||||||.|..|.||.|.|:.
Mosquito   392 AVDPQVKALDGQRYDVIFVGTNDGKVIKFVNILSA---NTSDDVRTVVISETQAFPPGTKINEMT 453

  Fly   488 ISTSKNSLVVVSDGSLVSVPLHHCSH--IVDCLGCLSLQDPICAWDLQTHECKNLATSQHKFGT- 549
            ||....:|:|:|.|.::|:|||.|:.  ...|..||.||||.||||....:||.: ...|..|. 
Mosquito   454 ISKKNAALIVISSGKIISLPLHTCNEHSFKTCRKCLDLQDPYCAWDDLNRDCKPI-DEVHASGAP 517

  Fly   550 -KTYLQSLNSTKKAAALLCPHIPRDAPGAETVSFVTMAPPPTEEQKLLYSNV-GSSQGNQP--SL 610
             ..:.|.|:..:  ...:|.......|...|.           |...:|:.| ||....:|  |.
Mosquito   518 IDQFYQRLDGER--IGEICRKYDHQEPTVHTY-----------EDNDVYTRVDGSGAVEKPDKSF 569

  Fly   611 EQQ-------------PTGGDDFGLNKITLTSMDPDD----IMPNLNDPQKSTASVDEIKYASTP 658
            :|:             ..|.:|.. |:|:::|::.|:    |:..|....|....|.:...::||
Mosquito   570 DQRNVLIVHANHGTVSSVGPEDID-NEISMSSVEGDEQTNRIINTLQYQPKPDTFVKQNVLSATP 633

  Fly   659 SFMLLTTIVFFTFLVGGIAGICCVKAKS-RLMEAQMDESHRNHF----GKPMQFKHQ--NTGKDI 716
            :  |::.::.|...|....|:.|:..:. .|.:.|....|||..    ||.:....|  .:|||:
Mosquito   634 N--LISLLLGFIVTVMVSVGVGCLFMRHLMLKKGQGGCEHRNQLHWQSGKSLSMLSQTRTSGKDV 696

  Fly   717 NLLMG-SNAYTTTQKT--------------PNLDLE-KDRSHECKNSTEHLEKELPCKTSTLTKV 765
            ||||. :|.|.|.|:.              .|:|.: ||||.|||||||:|||::.....||.|.
Mosquito   697 NLLMNTTNQYHTQQQAIVQQLQQHHQNNCKDNIDFDYKDRSVECKNSTENLEKDISKGMGTLQKT 761

  Fly   766 K 766
            :
Mosquito   762 R 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema1bNP_001163178.1 Sema_1A 55..511 CDD:200498 262/462 (57%)
PSI 510..>537 CDD:214655 12/28 (43%)
AgaP_AGAP005742XP_001688723.1 Sema_1A 29..477 CDD:200498 262/462 (57%)
PSI 480..>505 CDD:214655 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 499 1.000 Domainoid score I1223
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H122940
Inparanoid 1 1.050 627 1.000 Inparanoid score I2248
OMA 1 1.010 - - QHG28691
OrthoDB 1 1.010 - - D231201at33208
OrthoFinder 1 1.000 - - FOG0000892
OrthoInspector 1 1.000 - - oto110006
Panther 1 1.100 - - LDO PTHR11036
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X415
TreeFam 00.000 Not matched by this tool.
1111.080

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