DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sema1b and AgaP_AGAP000064

DIOPT Version :9

Sequence 1:NP_001163178.1 Gene:Sema1b / 37007 FlyBaseID:FBgn0016059 Length:770 Species:Drosophila melanogaster
Sequence 2:XP_311092.3 Gene:AgaP_AGAP000064 / 1272211 VectorBaseID:AGAP000064 Length:1919 Species:Anopheles gambiae


Alignment Length:753 Identity:151/753 - (20%)
Similarity:281/753 - (37%) Gaps:223/753 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LLITLSGLTIVAGWMPDVKPDLQTK-------QDKVLAHFIGNSTDYFKILDHNDEFVLVGAKDV 78
            |||.:|.|..    .|....::.:|       ..::::..:.|||.....:|.:...|.|||.:.
Mosquito    11 LLILISVLCA----QPQANHNVPSKGSNATDLSSRLVSQIVFNSTLNHLAVDRSTGSVYVGAVNK 71

  Fly    79 IYNVS--LNGLKEIARLEWHSTDADRELCAL----KGKHEWDCHNYLRVYALRPNGE-VLLCGTN 136
            :|.:|  ||.|..:..    ....|...|.:    .|..:....|..::..:..|.: :::|| :
Mosquito    72 LYQISNELNILTVVTT----GPQNDSYQCTILECPGGAVKTPMDNVNKMLLIDSNAKNLIVCG-S 131

  Fly   137 SYKPRC--RHYTPVEVSSEEAGSAGHAHAMRYEVSRDVEAQGLCPYSPAHNSTYAF--------- 190
            .::..|  |:...:.:..:|...|..|:.                   |:.||.||         
Mosquito   132 LFQGICHIRNLHNISIVEQEVLEAVVANT-------------------ANASTVAFIAPGPPLAS 177

  Fly   191 ADGH-LYSATVADFSGGDPLIYRENL-----RTEQYD-LKQLNQPD-------FVGAIERNGYVL 241
            |:.: ||.|..  |:|..|  ||..:     |:...| |.||....       ||....|..|::
Mosquito   178 AENNVLYVAVT--FTGNSP--YRSEIPAVSSRSLARDRLFQLAASAVTTGTRLFVNNYARETYII 238

  Fly   242 FFFRELSMEVMNF-------------GKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCS-- 291
            .:....|.|..::             .|...:::.|:|::|     ||..|:|   :..::|:  
Mosquito   239 NYVYGFSSERFSYFLTTQYKSSSHYASKERITKLVRICQDD-----SHYHSYT---EIPVDCTSK 295

  Fly   292 --------------VPGEFPFYFDEIQAISPIVESGSKSLIYAVF-TTSVNAIPGSAVCAFN--- 338
                          .||.        :....:..:.:..:::||| ..:.|.   ||:|.::   
Mosquito   296 DGTKFKTVSAAYVGKPGH--------ELAQSLEITTNDDVLFAVFDAPTANK---SALCVYSLKA 349

  Fly   339 -----VDDILAAFDGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFI---KNHP 395
                 :.:|...::||.....|..|..:|             |:  :..|.:|..:|.   .|.|
Mosquito   350 IRKKFMHNIKKCYNGEGLRGLDYISQNMP-------------CI--ATKLQTIGEDFCGLDVNSP 399

  Fly   396 L-MEEAVPAVHGRPLLTKVNLHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHP 459
            | .|:||.:      |..:....|:|::||      .:.:.:.|::.||:.|::.|.:...||  
Mosquito   400 LGGEQAVAS------LAVILSEERMTSVAV------TATSNFTVVFIGTETGQLKKIVMESST-- 450

  Fly   460 NSTVDRLKTVVISEMQV----LPLGTPIR-ELVISTSKNSLVVVSDGSLVSVPLHHCSHIVDCLG 519
                        |.||.    :.||:||: ::.:....:.|.::|...|..:.::.||....|..
Mosquito   451 ------------SAMQYAMMNVDLGSPIQPDMYLDPEHDDLYLMSLYKLFKIRIYDCSVYTTCHA 503

  Fly   520 CLSLQDPICAW-DLQT-----HECKN-----LATSQHKFGTKTYLQSL------NSTKKAAALLC 567
            |||.:||.|.| .|:.     :||::     |:...:|.|..|.:.|:      .:|.:...|:.
Mosquito   504 CLSAKDPFCGWCSLENKCSRRYECQDSSKDPLSWLSYKSGKCTTITSVTPHQLQRTTARTLELII 568

  Fly   568 PHIPR-DAPGAETVSFVTMAPPPTEEQKLLYSNVGSSQGNQPSLEQQPTGGDDFGLNKITLTSMD 631
            .::|. ..|.....:|.:|..|       :.:|....:.               |:|..|..:  
Mosquito   569 ENLPNLKEPLVCAFTFASMEKP-------IITNATKKRN---------------GVNCTTPRT-- 609

  Fly   632 PDDIMPNLNDPQKSTASVDEIKYASTPSFMLLTTIVFF 669
              |::|.:...:....:...||.:..|. ::.||..||
Mosquito   610 --DLLPQIGYGENHFNATLSIKTSQGPD-IVSTTFTFF 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sema1bNP_001163178.1 Sema_1A 55..511 CDD:200498 106/534 (20%)
PSI 510..>537 CDD:214655 11/32 (34%)
AgaP_AGAP000064XP_311092.3 Sema_plexin_like 51..492 CDD:200497 104/528 (20%)
PSI 494..546 CDD:279745 16/51 (31%)
PSI 645..>673 CDD:279745 151/753 (20%)
PSI 804..861 CDD:279745
IPT_plexin_repeat1 863..955 CDD:238585
IPT_plexin_repeat2 956..1041 CDD:238584
IPT 1057..1153 CDD:301692
Plexin_cytopl 1326..1890 CDD:285529
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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