Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031748739.1 | Gene: | sema5b / 100493363 | XenbaseID: | XB-GENE-959729 | Length: | 1104 | Species: | Xenopus tropicalis |
Alignment Length: | 540 | Identity: | 200/540 - (37%) |
---|---|---|---|
Similarity: | 286/540 - (52%) | Gaps: | 70/540 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 LAHFIGNST-----DYFKI-LDHNDEFVLVGAKDVIYNVSLNGLKEIARLEWHSTDADRELCALK 108
Fly 109 GKHEWDCHNYLRVYALRPNGE-VLLCGTNSYKPRCRHYTPVEVSSEEAGSAGHAHAMRYEVSRDV 172
Fly 173 EAQGLCPYSPAHNSTYAFAD-GHLYSATVADFSGGDPLIYRE-----NLRTEQYDLKQLNQPDFV 231
Fly 232 GAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGEF 296
Fly 297 PFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHWL 361
Fly 362 PVEREQVPKPRPGQCVEDS--RTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHRLTAIAV 424
Fly 425 HPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDR-LKTVVISEMQVLPLG--TPIREL 486
Fly 487 VISTSKNSLVVVSDGSLVSVPLHHCSHI---VDCLGCLSLQDPICAWDLQTHECKNLATSQHKFG 548
Fly 549 TKTYLQSLNSTKKAAALLCP 568 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 183/473 (39%) |
PSI | 510..>537 | CDD:214655 | 10/29 (34%) | ||
sema5b | XP_031748739.1 | Sema_5B | 68..504 | CDD:200525 | 181/469 (39%) |
PSI | 505..>533 | CDD:214655 | 10/30 (33%) | ||
TSP1 | 613..674 | CDD:214559 | |||
TSP1 | 679..725 | CDD:214559 | |||
TSP1 | 810..862 | CDD:214559 | |||
TSP1 | 867..919 | CDD:214559 | |||
TSP1 | 922..963 | CDD:214559 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |