Sequence 1: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001120908.1 | Gene: | sema3b / 100151737 | XenbaseID: | XB-GENE-921561 | Length: | 773 | Species: | Xenopus tropicalis |
Alignment Length: | 504 | Identity: | 158/504 - (31%) |
---|---|---|---|
Similarity: | 243/504 - (48%) | Gaps: | 61/504 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 64 LDHNDEFVLVGAKDVIYNVSLNGL-KEIARLEWHSTDADRELCALKGKH-EWDCHNYLRVYALRP 126
Fly 127 NGEVLL--CGTNSYKPRCRHYTPVEVSSEEAGSAGHAH--------AMRYEVSRDVEAQGLCPYS 181
Fly 182 PAHNSTYAFADGHLYSATVADFSGGDPLIYRE-----NLRTEQYDLKQLNQPDFVGAI------- 234
Fly 235 ERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKARLNCSVPGE---F 296
Fly 297 PFYFDEIQAISPIVESGSKS-LIYAVFTTSVNAIPGSAVCAFNVDDILAAFDGEFKSQKDSQSHW 360
Fly 361 LPVEREQVPKPRPGQC-------VEDSRTLTSIAVNFIKNHPLMEEAVPAVHGRPLLTKVNLHHR 418
Fly 419 LTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINILSTHPNSTVDRLKTVVISEMQVLPLGTPI 483
Fly 484 RELVISTSKNSLVVVSDGSLVSVPLHHCS-HIVDCLGCLSLQDPICAWD 531 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 149/481 (31%) |
PSI | 510..>537 | CDD:214655 | 9/23 (39%) | ||
sema3b | NP_001120908.1 | Sema_3B | 43..514 | CDD:200511 | 149/481 (31%) |
PSI | 513..550 | CDD:214655 | 9/23 (39%) | ||
Ig | 575..663 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |